[Fri Aug 26 17:08:29 2016] >Input file: TMP60509M4D.pdb >TM segments: 380-400 MAIDEN score = -3.0003 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E391 -A396 0.680408570780102 L384 -T394 0.414389202850194 D385 -C395 0.377727334189246 I386 -G393 0.336531124281613 T388 -L397 0.333001264010204 T394 -K399 0.247299968050392 L384 -G393 0.243980603621495 N380 -G393 0.231957912993101 D385 -G392 0.231229064687013 D385 -K399 0.224724254772418 G392 -L397 0.210190355136906 R381 -T394 0.205709373201135 G393 -T400 0.199984841795072 M382 -L397 0.197450991196672 I386 -G392 0.191968502339966 N380 -T394 0.180148923493189 D385 -G393 0.171208659097345 D385 -E391 0.161086165783044 I386 -C395 0.159870695972301 R381 -A389 0.148961794916085 R381 -A396 0.126657315655389 T388 -K399 0.126284081881388 A389 -I398 0.125862128320652 L387 -G393 0.12404237904656 R381 -I386 0.108198963604511 L384 -A389 0.10686950646741 A383 -G392 0.102797436406737 R381 -G392 0.0807942840911697 A389 -C395 0.0799426482970842 A383 -C395 0.0709201653700999 G392 -K399 0.0707724848378857 D385 -I398 0.0661742616601617 M382 -G392 0.0650737426184937 L387 -I398 0.0617327693676142 A383 -A396 0.0568593546560039 L387 -A396 0.049345131812327 A383 -A390 0.0489914962092086 A383 -L397 0.0449333867119317 M382 -T394 0.0447470900132707 C395 -T400 0.0404137117537378 D385 -L397 0.0367298534818463 M382 -I398 0.0317367180731161 L384 -A396 0.0290690583902133 M382 -A396 0.0242021550846416 N380 -T388 0.0165661489275788 R381 -G393 0.015451587914824 I386 -T394 0.0122080753261957 L384 -A390 0.0112827432277678 M382 -G393 -0.00306663339636337 M382 -A390 -0.00435006383640868 T388 -G393 -0.00879316673120734 N380 -D385 -0.00997326949762556 G392 -T400 -0.0153604116923476 N380 -A389 -0.0165110248712954 A390 -I398 -0.0169925216157845 R381 -T400 -0.0295553229481236 I386 -A396 -0.0305117147570648 R381 -I398 -0.0326523029841194 M382 -C395 -0.0406762431008063 A390 -C395 -0.0448712953063484 A383 -I398 -0.0465720311466171 D385 -A390 -0.053277906220595 L387 -L397 -0.056558794679618 L387 -C395 -0.0569124184187251 I386 -E391 -0.0579567878721081 A383 -E391 -0.0639062931000807 R381 -T388 -0.0658424554168073 T394 -T400 -0.0757140656214688 R381 -E391 -0.0857016842214304 I386 -L397 -0.0948626457053953 L384 -E391 -0.0950125045190147 R381 -K399 -0.0980303438666352 L384 -I398 -0.103170464715999 A383 -G393 -0.104457863610754 L387 -T394 -0.106685905554381 M382 -T388 -0.108011318007678 D385 -T400 -0.109567621299867 R381 -L397 -0.119030235408805 G393 -K399 -0.122172952269421 N380 -I398 -0.123962414292345 N380 -L387 -0.137331716293048 A383 -T394 -0.1381576240359 A389 -K399 -0.145177795245149 G393 -I398 -0.148103312861332 T388 -A396 -0.149660616602032 I386 -I398 -0.167409814417231 E391 -L397 -0.16925831674091 L384 -G392 -0.17155650502389 E391 -K399 -0.172083985079969 A390 -L397 -0.17370610606704 M382 -E391 -0.183956377039531 G392 -I398 -0.191791209377249 E391 -I398 -0.195896386329133 A390 -A396 -0.198564109931022 M382 -A389 -0.20348551341962 L387 -G392 -0.212933494357862 L384 -K399 -0.217265007764446 R381 -L387 -0.220652609003882 A389 -T394 -0.22658177814955 T388 -I398 -0.233769304682788 D385 -A396 -0.233809032346758 A389 -A396 -0.236656333819314 N380 -I386 -0.23980103348568 T388 -T394 -0.243091517564322 A383 -A389 -0.243178442749842 N380 -C395 -0.272115704459082 L384 -L397 -0.276238874426683 L384 -C395 -0.279541179604298 D385 -T394 -0.287847415011461 A389 -L397 -0.303163811220764 T388 -C395 -0.316174789991496 A383 -T388 -0.375568867116342 M382 -L387 -0.396985997394689 R381 -C395 -0.564525396843786