[Mon Aug 29 17:10:29 2016] >Input file: TMP61554M1G.pdb >TM segments: 357-389_ 406-427 MAIDEN score = -8.7539 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I374 -T380 1.70627148666824 T375 -Y381 0.723652592321681 I374 -L379 0.691371008646505 G373 -S378 0.598922768414842 I374 -Y381 0.440851544410639 I371 -K376 0.4249480160325 T380 -E387 0.39152479910009 R418 -L423 0.376150168035963 A377 -S382 0.337431379893933 S378 -Q383 0.31455765724017 L384 -A389 0.298467796388554 G370 -S378 0.297809201261896 G370 -L379 0.281492881582938 K376 -Q383 0.274006278951394 Y381 -K386 0.237859253341092 V413 -R418 0.230378974429332 V412 -R417 0.222044144555009 R418 -Q427 0.219696116020756 V412 -G419 0.214942247572475 G373 -L379 0.197451579361124 R417 -Q427 0.194878171552039 V413 -M422 0.192003728799433 A372 -Y381 0.191550461046793 L358 -G366 0.179414773033289 G368 -A377 0.167027580392108 T375 -L384 0.159178962443017 G362 -G370 0.157132534878023 I374 -S382 0.153413761252681 L361 -G368 0.152259190993977 G368 -K376 0.152173535275737 Q415 -M422 0.151066803968747 D407 -N416 0.150005685550716 R417 -A425 0.146096985026882 A410 -G419 0.14397189847509 I374 -K386 0.133574498699957 T367 -T380 0.130717613066602 G373 -L384 0.126208880706641 L414 -M422 0.125069280062745 I371 -Q383 0.124917914890274 T367 -K376 0.119648605073164 A372 -Q383 0.119598284644634 L379 -K386 0.116921497724825 A411 -G419 0.115934545386926 L358 -A365 0.115591737565276 T369 -A377 0.114665066748012 Y381 -A389 0.109856001894317 A410 -R418 0.106621076504843 G419 -A426 0.106469040701449 L379 -L384 0.105222861009423 G373 -T380 0.103773881815727 G360 -G370 0.100862620012248 A365 -G373 0.10040925961918 G362 -T369 0.0987918662352567 G370 -A377 0.0977818821958596 S378 -K386 0.0974195533251467 I371 -L384 0.0938017842234385 A411 -R418 0.0931449167579892 T380 -I388 0.0899368592067959 G366 -G373 0.0855629674517591 S378 -L384 0.0849436054304551 G360 -G368 0.0822400797178768 K376 -S385 0.0805144648496325 K376 -E387 0.0791777879694076 Q415 -L420 0.0769872970371748 L357 -A365 0.0685159789079348 G419 -Q427 0.067842192395859 I371 -S378 0.0645087903831345 I371 -A377 0.0636263017267449 L420 -A426 0.0632514758117031 L414 -L423 0.0629399851253529 G366 -I374 0.0592525769560033 R418 -A425 0.0591767445226523 L379 -I388 0.0565028913621852 T375 -K386 0.0557282177906524 G370 -S382 0.0532045138623508 G373 -S385 0.050672460186449 A410 -L420 0.0482196009017493 T375 -S385 0.046307168177723 A365 -I374 0.0437705160474371 L414 -G419 0.0420643937839085 T369 -L379 0.0398364233914998 A359 -G368 0.0392927414576385 A377 -S385 0.0333348163115357 A372 -L379 0.0255708908300738 Q415 -T424 0.0238612978703316 D407 -Q415 0.0236291694000803 L361 -G370 0.021297861052832 T369 -Y381 0.0191612272200588 S408 -N416 0.0160187602789474 L361 -T369 0.0141272333318563 T369 -S378 0.0121534319546948 S408 -V413 0.00560161464328068 L357 -T367 0.00529411131273427 L361 -G366 0.00285915055807617 A410 -Q415 0.000596279915447973 G370 -Q383 -0.00382782805142812 T369 -S382 -0.00415579710036829 I371 -T380 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-0.0736769082039483 A377 -I388 -0.0763722857448723 R417 -M422 -0.0776728724052793 R418 -T424 -0.0793376312434972 T380 -S385 -0.0796105609123821 A372 -T380 -0.08515176747725 S378 -I388 -0.0858018375197176 L357 -G366 -0.0858151973914145 N416 -L423 -0.0862733578643269 N416 -T424 -0.088500075070471 I371 -L379 -0.0924820622061515 L364 -G373 -0.0956904934484761 A359 -G366 -0.101254338358388 G373 -S382 -0.104237252475443 N416 -M422 -0.107996756927645 L364 -T369 -0.109717127968603 G362 -I371 -0.110852197414769 A372 -S382 -0.111381001750403 S408 -R417 -0.111989016582421 L409 -R418 -0.112733884336238 A359 -T367 -0.114162418007485 D407 -V412 -0.116043317347562 I406 -Q415 -0.11734987056681 A377 -K386 -0.120099351755846 G362 -T367 -0.120959239306311 V413 -G419 -0.122256017343247 I406 -L414 -0.123898060703235 V413 -D421 -0.126882801835975 T367 -T375 -0.129824780003592 T369 -K376 -0.138544485313633 G373 -Y381 -0.143804906777204 Y381 -I388 -0.143897566326991 R418 -A426 -0.144892803178817 L409 -R417 -0.149218497751091 V412 -R418 -0.150967948603662 T375 -Q383 -0.154214466113918 I374 -E387 -0.154746641934699 Q383 -A389 -0.155670714316671 A410 -N416 -0.155763295453745 I371 -S382 -0.156164010996964 A377 -E387 -0.159533460883799 A365 -G370 -0.16118878384149 A365 -A372 -0.16140509113037 A411 -L420 -0.162535065134378 A372 -A377 -0.162631558796326 I406 -V413 -0.16282629868389 V413 -L420 -0.16314940282429 Q383 -I388 -0.166359504020585 I371 -Y381 -0.17291243914898 A411 -R417 -0.172948197271709 S382 -I388 -0.173179886781574 L409 -N416 -0.174852936658132 G362 -G368 -0.176270431809999 A377 -Q383 -0.179181835610768 K376 -K386 -0.183765113843847 T375 -T380 -0.188136878276974 S408 -Q415 -0.188452980841117 S382 -A389 -0.195180383500419 G370 -T380 -0.20129373007413 Y381 -E387 -0.203037042864806 K376 -L384 -0.207881237658966 T369 -I374 -0.210347671420345 G360 -T367 -0.210388789493058 G368 -T375 -0.211543616095083 A359 -L364 -0.213900585140246 L357 -L364 -0.213938729103236 T375 -E387 -0.214250660037054 T375 -S382 -0.215747905446617 D421 -A426 -0.21672377442299 A410 -R417 -0.217898763377486 A359 -A365 -0.219857294855448 I363 -I371 -0.220230014467586 L361 -T367 -0.222675636101913 R417 -L423 -0.225147444058708 L357 -G362 -0.231027300191217 A411 -N416 -0.234791091085609 T367 -I374 -0.234800263352136 D407 -L414 -0.239302135728822 G366 -I371 -0.239320604967185 I363 -G368 -0.240653919965391 T367 -G373 -0.242430846887584 K376 -S382 -0.250335042918319 V412 -D421 -0.257639437693 T380 -K386 -0.260054623718518 G366 -A372 -0.265645675352803 T369 -T380 -0.26811959371568 G368 -I374 -0.271842434750893 G419 -T424 -0.272469190075252 L358 -I363 -0.274291603886439 L414 -D421 -0.275890815908717 I363 -G370 -0.28036076729873 S408 -L414 -0.281259534805698 G368 -G373 -0.283258014374187 L420 -A425 -0.297866210843213 D407 -V413 -0.300247097795477 I374 -Q383 -0.312449362847147 M422 -Q427 -0.314785256136137 I406 -A411 -0.324908323211126 L409 -L414 -0.326486356719753 A365 -I371 -0.338475698828225 G370 -T375 -0.34385505678097 L364 -G370 -0.347595026836218 I406 -V412 -0.348523913622548 L364 -I371 -0.361718458573055 T369 -T375 -0.371374514182592 G360 -A365 -0.393668312782323 I374 -L384 -0.394394850683422 L414 -L420 -0.398507845261355 I363 -T369 -0.409485070980652 L358 -L364 -0.430081609884922 L409 -Q415 -0.48820583815823