[Mon Aug 29 17:10:41 2016] >Input file: TMP61555S1G.pdb >TM segments: 405-426 MAIDEN score = -6.3638 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V412 -R417 0.412076813473356 V413 -R418 0.364508336216174 V412 -M422 0.336433635386711 R418 -L423 0.301637876062761 A410 -Q415 0.260078189407102 R417 -A425 0.234085366440266 L420 -A425 0.200070107089121 Q405 -A410 0.187379146725443 D407 -R417 0.176289872446437 A410 -R418 0.14548631138051 D407 -N416 0.122248528933471 A410 -L420 0.116427393423048 G419 -A426 0.115912779347974 Q415 -L420 0.114135286713219 L420 -A426 0.110407068409546 Q405 -L414 0.0917753180797358 R417 -A426 0.0648570083876329 D407 -Q415 0.0468593875689336 S408 -V413 0.0466894034149981 Q415 -L423 0.0342924492462879 S408 -N416 0.0172708356355825 V413 -L423 0.0120840846068533 R417 -M422 0.00805685661033095 D421 -A426 0.00128863166089932 L409 -G419 0.000428998447270401 N416 -A425 -0.00016515862532529 Q405 -V413 -0.000513703873066484 A410 -G419 -0.0161970625870058 Q415 -T424 -0.017231262487249 A411 -G419 -0.025769991996349 Q415 -A425 -0.0303310784391915 R418 -T424 -0.0419916060950423 Q415 -M422 -0.0441738148984321 N416 -D421 -0.0507493755990338 N416 -T424 -0.057811110282274 I406 -L414 -0.0761823001440576 V412 -D421 -0.0789432060222968 R418 -A426 -0.0796583732858673 Q415 -D421 -0.0837802691770648 S408 -R417 -0.0939466083941183 I406 -Q415 -0.0983454597100297 L409 -R417 -0.109695965931884 V413 -D421 -0.110755264610925 L414 -M422 -0.122395145564595 V412 -G419 -0.123151560826277 D407 -V412 -0.124442059821899 V413 -M422 -0.132202233952619 A411 -L420 -0.136250496211219 I406 -N416 -0.145199992006717 R417 -T424 -0.145379494002482 S408 -Q415 -0.1491349984552 L414 -L423 -0.149833740810007 V413 -G419 -0.152904685031555 V413 -L420 -0.163616354167579 L409 -R418 -0.165763129297763 N416 -M422 -0.166285024433109 Q405 -V412 -0.16836613388602 V412 -R418 -0.171916927760887 A410 -R417 -0.175199999970819 R417 -L423 -0.175628223461613 L409 -N416 -0.193279054466529 A411 -R417 -0.195144884559231 R418 -A425 -0.197711758812045 N416 -L423 -0.199716890119006 Q405 -A411 -0.213180138175409 I406 -A411 -0.217451843004316 A410 -N416 -0.224207749815697 A411 -N416 -0.226371479758589 V412 -L420 -0.226380734462125 S408 -L414 -0.241448580720898 A411 -R418 -0.244888110951462 G419 -A425 -0.25270877729607 L414 -L420 -0.256046660571636 D407 -V413 -0.267925439411233 L414 -D421 -0.303613413417986 D407 -L414 -0.304367199412688 G419 -T424 -0.327706527356312 L414 -G419 -0.392533068048122 L409 -L414 -0.41626693333778 I406 -V412 -0.430736106038003 I406 -V413 -0.469522045453483 L409 -Q415 -0.499471364051627