[Mon Aug 29 17:11:56 2016] >Input file: TMP61561M6G.pdb >TM segments: 404-422 MAIDEN score = -3.4857 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E416 -R422 0.2613451932286 S411 -E416 0.119171791503724 S411 -K419 0.104480208383487 Y407 -I413 0.102779091853194 G412 -E420 0.0944680493309362 Y407 -V414 0.0938317938338766 S411 -E420 0.0862865837681319 V414 -R422 0.0701544182993519 N409 -V414 0.0601642522932444 N409 -T415 0.0576976219936647 V408 -T415 0.0449008694367539 Q410 -V418 0.0302102592812874 Q410 -K417 0.02236649700263 E416 -I421 0.00554807166806626 G412 -K419 -0.0111608536927483 V408 -I413 -0.0197728275930062 Y407 -G412 -0.0210891863294851 N409 -E416 -0.0421943449089843 V414 -K419 -0.0427468595315608 C404 -N409 -0.058618013331063 S411 -K417 -0.0596913586582387 V408 -V414 -0.0829119560653884 I413 -K419 -0.0830181964097632 T415 -E420 -0.0883000290603557 Q410 -E416 -0.0917530893712537 N409 -V418 -0.108501418858753 G412 -I421 -0.110028526406035 T415 -R422 -0.12813749566624 K417 -R422 -0.130325820168152 Q410 -T415 -0.156149250543721 V414 -E420 -0.173373210457123 C405 -Q410 -0.174923834056961 G412 -V418 -0.181316464991136 I413 -R422 -0.18362762354021 I413 -E420 -0.194795583276171 C404 -Q410 -0.197609472221836 V414 -I421 -0.199275288360336 N409 -K417 -0.206535575369065 I413 -I421 -0.234331283838957 Q410 -K419 -0.23808070172355 S411 -V418 -0.256814037639555 G412 -K417 -0.261991228260614 T415 -I421 -0.415551694148844 I413 -V418 -0.486496958639871