[Fri Aug 26 17:13:14 2016] >Input file: TMP61562S1D.pdb >TM segments: 368-400 MAIDEN score = -8.6157 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D370 -L375 0.557295858299891 D387 -F399 0.468295839328142 T390 -F399 0.461599550962305 R383 -L388 0.45879798526107 A391 -T396 0.426179573800232 V378 -R383 0.410339347877688 R393 -L400 0.400962435806718 G394 -F399 0.377960131093085 L389 -T396 0.363609015089214 V379 -R384 0.363091419653478 R383 -C397 0.355953351329612 L386 -G395 0.346093504094148 D387 -C397 0.335238225822066 R383 -T396 0.322575997772928 R384 -L389 0.300414829984614 A376 -Q381 0.265627307760267 N382 -C397 0.258968837134877 Q381 -T396 0.2397908258231 R383 -A391 0.231751668135667 L388 -G395 0.222946439154589 N382 -G395 0.213208997215326 Q371 -A376 0.205858426435685 L389 -G395 0.201967149867055 L389 -C397 0.162513670249961 R383 -E392 0.159707177141087 L386 -A391 0.155253060931825 L388 -C397 0.15358339955743 R393 -F399 0.149038839614241 A376 -R384 0.145419858717326 Q381 -L386 0.137098655339615 D387 -L398 0.135926936995129 N373 -N382 0.134599285656349 D387 -G394 0.128563111732681 L388 -L400 0.125706888417726 R383 -G394 0.114578471041452 L372 -L380 0.110320658483005 A376 -L386 0.106772520871202 A385 -G394 0.104708389028077 N373 -R383 0.100062586670601 Q371 -L380 0.0913159190702699 E392 -L398 0.0845703445279846 L380 -G395 0.081264844136312 R384 -L398 0.0777864372417626 Q369 -A377 0.0744431487436366 T390 -T396 0.0737461243234954 A376 -A385 0.0716095283627274 N382 -F399 0.0704920322413427 L372 -Q381 0.0639894827325778 V379 -G395 0.0503914893456014 S374 -V379 0.0488094941161386 L375 -A385 0.0482196009017493 A385 -F399 0.0471243829311692 R384 -F399 0.0436332779664834 A377 -A385 0.043132684260649 Q381 -L389 0.0373878802932763 L368 -N373 0.0267548631062615 D370 -A377 0.0247371863978856 L386 -E392 0.0217841708289457 S374 -N382 0.016895990016693 L389 -L398 0.0161661741321684 L380 -C397 0.0149142144228926 A391 -C397 0.0144502545080774 R383 -R393 0.0132711013999045 R383 -F399 0.0132383795088269 V378 -L388 0.0120840846068533 R384 -G395 0.0113456452437286 Q371 -V379 0.000701058666078058 E392 -L400 0.000202478677369999 N382 -A391 -0.00139127164550557 Q369 -V378 -0.00537652964294866 V379 -T396 -0.00549760072477579 R384 -G394 -0.00902852531142129 L380 -T396 -0.0113854170407315 Q369 -V379 -0.013362712600739 Q381 -T390 -0.0181109211253689 E392 -F399 -0.0209147483710352 N373 -Q381 -0.0212950791517685 Q381 -A391 -0.0271788033104245 D370 -V379 -0.027216878036028 L388 -F399 -0.0315321746687722 D387 -E392 -0.034514498298444 R384 -R393 -0.0363206396011304 A391 -L398 -0.039717575394147 D370 -V378 -0.0397244619484312 R383 -G395 -0.0407707108457775 R384 -T390 -0.0416650961826264 N382 -L388 -0.0466469068697677 L368 -A376 -0.0488893703486015 R393 -L398 -0.0494115196836269 A385 -C397 -0.05102335087392 N382 -D387 -0.0529694486404702 N382 -T390 -0.0542965151407273 A385 -L400 -0.0545294333530215 A385 -E392 -0.0677482511758002 A385 -R393 -0.0679335362079856 L386 -L398 -0.0698365757031283 R384 -L400 -0.0728579597466383 R383 -L400 -0.0753545269562865 V378 -D387 -0.0755518714555423 Q381 -D387 -0.0855792437201195 D370 -L380 -0.0898969246953829 Q381 -G395 -0.0900212434399381 L386 -T396 -0.0904039289182981 S374 -R383 -0.0949636551844764 D387 -R393 -0.0951591430202412 Q369 -S374 -0.0973924434871192 L368 -A377 -0.100689050029366 L388 -G394 -0.10092693428992 A385 -T396 -0.104168744189388 V379 -L388 -0.104646156010313 L372 -N382 -0.106164054099388 A391 -L400 -0.10787923666304 T390 -L400 -0.108101668323421 V379 -D387 -0.109689935031214 L375 -R383 -0.114883554584897 V379 -C397 -0.118997031773167 L372 -A377 -0.119868925483239 L386 -F399 -0.121868295705044 A377 -L386 -0.126721148915117 Q369 -A376 -0.127434884151906 L388 -R393 -0.129604552397833 R383 -L398 -0.145649132159671 R383 -T390 -0.145758290066688 L388 -L398 -0.147769726282272 N373 -V378 -0.148521754372304 S374 -Q381 -0.151198429512078 L380 -L389 -0.152097034281021 L380 -L388 -0.155272191349111 L386 -G394 -0.155588863021142 L386 -R393 -0.161420705979163 R384 -E392 -0.161546131127668 N382 -T396 -0.162752107228933 V379 -L386 -0.16311198062015 A385 -L398 -0.165582207036591 L375 -R384 -0.166084143190213 Q371 -V378 -0.169126921879132 L388 -T396 -0.169610840256775 V378 -R384 -0.171914734778666 Q381 -C397 -0.17483183532689 A376 -R383 -0.176333839681796 L386 -L400 -0.177478673901366 L386 -C397 -0.179555166994109 R383 -L389 -0.180659866028653 R384 -T396 -0.182716437518636 G394 -L400 -0.190807126769304 L375 -N382 -0.191294445240054 D387 -L400 -0.193277963308926 A377 -R383 -0.194158216476263 V379 -A385 -0.194315440238967 D387 -G395 -0.195017954666548 R384 -A391 -0.195094437683357 N382 -L389 -0.197433495669147 L368 -S374 -0.201870536144011 L368 -L375 -0.207342823365488 D370 -A376 -0.21233309667155 Q371 -A377 -0.213823822895466 L380 -A385 -0.21610008032717 V378 -L386 -0.22245253290806 A385 -G395 -0.222453482474109 A376 -N382 -0.224587806218227 L380 -L386 -0.22779721480466 A377 -N382 -0.228209820943071 L389 -L400 -0.230295965446406 N373 -L380 -0.230906966614076 A385 -A391 -0.233278807460908 S374 -L380 -0.238732295227202 Q381 -L388 -0.239647955835724 A377 -R384 -0.24506001295984 A385 -T390 -0.256471401305451 T390 -G395 -0.271106244130904 L389 -G394 -0.273938520475632 L389 -F399 -0.27971639452403 V378 -A385 -0.288331032324676 N373 -V379 -0.293516043314215 L380 -D387 -0.303239355119796 T390 -C397 -0.310515738785659 T390 -L398 -0.314773971292658 L372 -V379 -0.387420383399655 L372 -V378 -0.399464648838169 G395 -L400 -0.40200964062067 L375 -L380 -0.419229653863129 D387 -T396 -0.425227572883922 A391 -F399 -0.439486054670216 Q369 -L375 -0.479397311762416 L375 -Q381 -0.501890838768066 E392 -C397 -0.603546632926211 R384 -C397 -0.605227871875287