[Fri Aug 26 17:13:55 2016] >Input file: TMP61564S1D.pdb >TM segments: 368-400 MAIDEN score = -7.9593 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D387 -F399 0.46821978288396 T390 -F399 0.462836910959037 R383 -L388 0.457867503427138 A391 -T396 0.426731154132022 V378 -R383 0.410676660411957 R393 -L400 0.399880363962033 G394 -F399 0.372631315444539 V379 -R384 0.364294179569535 L389 -T396 0.363796193122759 R383 -C397 0.356761324584148 L386 -G395 0.344479775438122 D387 -C397 0.33436829316312 R383 -T396 0.322695123425845 R384 -L389 0.300550318095259 A376 -Q381 0.268985942864621 N382 -C397 0.258575814742337 Q381 -T396 0.239942372018004 R383 -A391 0.231427355338938 L388 -G395 0.217771036664344 N382 -G395 0.214012825993683 L389 -G395 0.203296406651754 Q371 -A376 0.202866116027529 L389 -C397 0.162888209082659 R383 -E392 0.159707177141087 L388 -C397 0.153477792664837 L386 -A391 0.153314284593513 R393 -F399 0.14880037991886 A376 -R384 0.145548785636184 Q381 -L386 0.137978424042644 D370 -I375 0.137010670712963 D387 -L398 0.135596259071119 N373 -N382 0.133597716102416 D387 -G394 0.129954595712506 L388 -L400 0.125546974492652 R383 -G394 0.114790555057333 L372 -L380 0.108823198779558 A376 -L386 0.10610263502762 A385 -G394 0.104774606692687 N373 -R383 0.102554258495041 Q371 -L380 0.091830072019911 E392 -L398 0.084505100843031 L380 -G395 0.0833966592772128 R384 -L398 0.0778434888155723 Q369 -A377 0.0747518026932115 T390 -T396 0.0736290097789709 A376 -A385 0.072689029253449 N382 -F399 0.0704920322413427 L372 -Q381 0.0671420403037439 I375 -A385 0.0627650383161376 V379 -G395 0.0503196523452718 I375 -R383 0.04686990154566 A385 -F399 0.0467602267721432 R384 -F399 0.0444928412791885 A377 -A385 0.0428747521671315 Q381 -L389 0.0368933560574458 S374 -V379 0.0361049477986128 L368 -N373 0.0282946794036598 D370 -A377 0.0261758994797869 L386 -E392 0.0214076453371983 S374 -N382 0.0174722650644052 A391 -C397 0.0150623277041775 L380 -C397 0.0149192236550111 L389 -L398 0.0147611024127148 R383 -R393 0.013940066232172 R383 -F399 0.0133187113457698 R384 -G395 0.0129065382638731 V378 -L388 0.0120840846068533 I375 -Q381 0.00837254262200204 E392 -L400 0.000616095521510651 Q371 -V379 -0.000417635883182887 N382 -A391 -0.00154139600032821 V379 -T396 -0.00506338695831365 Q369 -V378 -0.00511669243075419 Q369 -I375 -0.00856703696055305 R384 -G394 -0.00919901457229599 L380 -T396 -0.0129618240047735 Q369 -V379 -0.0136513226799675 Q381 -T390 -0.0183131614657692 N373 -Q381 -0.019685881251188 E392 -F399 -0.0207765980796251 Q381 -A391 -0.027254625654046 D370 -V379 -0.028900289300009 L388 -F399 -0.0307795951019489 D387 -E392 -0.0358198018117029 R384 -R393 -0.0362151997731396 D370 -V378 -0.0381725552425767 A391 -L398 -0.0394500756270917 R383 -G395 -0.0404841479900966 R384 -T390 -0.041521166931564 N382 -L388 -0.0477619057791348 L368 -A376 -0.0500576380056206 R393 -L398 -0.0501849486608839 A385 -C397 -0.0510317058864925 N382 -D387 -0.0531933827507964 A385 -L400 -0.0539842423606025 N382 -T390 -0.0542965151407282 A385 -E392 -0.0677501348100388 A385 -R393 -0.0686707385279703 L386 -L398 -0.0689993561206661 R384 -L400 -0.0728938486264934 V378 -D387 -0.0742180310042375 R383 -L400 -0.0743599537459776 Q381 -D387 -0.0859226215836377 Q381 -G395 -0.0891529442670613 D370 -L380 -0.0898969246953829 L386 -T396 -0.091510670651032 S374 -R383 -0.093501388745503 D387 -R393 -0.0942015331094841 Q369 -S374 -0.0949542307206859 L388 -G394 -0.0978572832885654 L368 -A377 -0.102063509472216 A385 -T396 -0.104198085364416 V379 -L388 -0.104633423879597 T390 -L400 -0.10767129628525 A391 -L400 -0.10788246770911 V379 -D387 -0.108923193749906 L372 -N382 -0.110558955032462 V379 -C397 -0.118804777628978 L386 -F399 -0.122580247630156 Q369 -A376 -0.126192009352519 A377 -L386 -0.126306766395308 L388 -R393 -0.131405000078622 L372 -A377 -0.131656366586407 R383 -L398 -0.145512568487135 R383 -T390 -0.145758290066688 N373 -V378 -0.146834142874127 L388 -L398 -0.147304971328584 L380 -L389 -0.151823143967043 S374 -Q381 -0.152185373454032 L380 -L388 -0.154195610489525 L386 -G394 -0.156256755993251 L386 -R393 -0.160535480243985 R384 -E392 -0.161308761769318 N382 -T396 -0.162722903829124 V379 -L386 -0.164800409493683 A385 -L398 -0.165582207036591 Q371 -V378 -0.166866018710793 L388 -T396 -0.168033847067624 L368 -S374 -0.168635804140147 V378 -R384 -0.171911383122917 Q381 -C397 -0.174619160150228 A376 -R383 -0.176184033434576 L386 -L400 -0.177178433465903 L386 -C397 -0.177429009280481 R383 -L389 -0.181085716857813 I375 -R384 -0.182283419990556 R384 -T396 -0.183184427089007 D387 -G395 -0.190674051080887 D387 -L400 -0.192694872778326 G394 -L400 -0.193125267334823 V379 -A385 -0.193725240971753 A377 -R383 -0.194244617901472 R384 -A391 -0.194927511186131 N382 -L389 -0.197411932964657 D370 -A376 -0.2120185547368 Q371 -A377 -0.21520975857796 L380 -A385 -0.215955103493897 A385 -G395 -0.220718875760126 V378 -L386 -0.222226410961359 A376 -N382 -0.22490240797553 L380 -L386 -0.224939482093461 N373 -L380 -0.22748007748715 A377 -N382 -0.22773079984448 L389 -L400 -0.230126582384647 A385 -A391 -0.233198365391909 Q381 -L388 -0.239687075505166 S374 -L380 -0.241137235287737 A377 -R384 -0.245199612567791 I375 -L380 -0.256863171948613 A385 -T390 -0.257556475658522 T390 -G395 -0.264765118968019 L389 -G394 -0.276447639933647 L389 -F399 -0.279584782866281 V378 -A385 -0.288331032324675 N373 -V379 -0.300551812641673 L380 -D387 -0.303042301409113 T390 -C397 -0.310496623130618 T390 -L398 -0.314867004125404 I375 -N382 -0.318058101834497 L368 -I375 -0.340120018094956 L372 -V379 -0.372931560854862 L372 -V378 -0.401449097080121 G395 -L400 -0.405289650966634 D387 -T396 -0.424800688271094 A391 -F399 -0.440354808495725 E392 -C397 -0.603782048837924 R384 -C397 -0.605099980071513