[Mon Aug 29 17:14:10 2016] >Input file: TMP62957M1G.pdb >TM segments: 129-169 MAIDEN score = -4.3867 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- F132 -S166 1.40072120092601 V146 -L151 0.626226138847811 S134 -S166 0.59736624634137 F132 -S165 0.524359542064847 F132 -S167 0.459639916382965 E159 -P164 0.450029628316357 S134 -S167 0.378899012951068 I129 -R163 0.371179862344592 V147 -Y152 0.361659658698207 Y152 -D158 0.30858396558684 I156 -M161 0.307173513160379 I153 -D158 0.301663974758899 V150 -S155 0.288074408702655 D158 -R163 0.277573374615724 A131 -R163 0.265341657911581 S144 -L151 0.258135263478256 A131 -S165 0.257570888226493 L130 -S166 0.256115042164255 V133 -S165 0.255212124738027 L130 -S165 0.253914432762803 G148 -I153 0.230046501091451 V133 -S166 0.226362524696949 S144 -S155 0.224017829815451 S134 -Q169 0.211536423586471 A131 -P164 0.210118132510171 I156 -R163 0.202899239215679 L149 -S154 0.194767820488433 G148 -N157 0.187890177958719 S154 -N162 0.185314990782703 S134 -N157 0.183963614068866 G142 -L149 0.177821791750258 G135 -N157 0.177387151560302 S144 -S154 0.167375917036371 I139 -I156 0.163705526715866 F138 -I153 0.159980624647899 I129 -M161 0.153653564975677 L149 -S155 0.153518727381075 G135 -S165 0.152430388779544 S141 -V146 0.136012820114329 I136 -I153 0.132991361282137 V133 -S167 0.130295230432245 R163 -Q169 0.129571957511617 G135 -E168 0.125616980835896 F137 -G148 0.121681573580543 Y152 -M161 0.120519333797603 S154 -V160 0.117508233366341 F132 -N162 0.117333875290549 F137 -S154 0.11678696937525 L130 -S167 0.109435683471184 G135 -I153 0.0982237194897244 I136 -I156 0.0953593666422003 L143 -V150 0.0935802027417716 L143 -I156 0.0873136112485801 I136 -Y152 0.0872707966440682 G142 -Y152 0.0871747706982848 I136 -P164 0.0825067193979987 G135 -R163 0.079619353258475 L140 -G148 0.0783505502313737 L149 -D158 0.0732071776913155 S141 -Y152 0.0701203138985083 I139 -L151 0.0650008625438656 A131 -I136 0.064041404002332 I136 -S166 0.0628485529359544 S141 -I153 0.0622976579110477 F138 -L145 0.0574786399228833 L140 -I156 0.0559592451284898 N157 -N162 0.0551953201948002 I136 -N157 0.0523348035098303 S155 -N162 0.0521338503584778 I129 -I136 0.0520155677016998 S134 -R163 0.0503937385992312 A131 -S166 0.0490572889227341 F132 -E168 0.0484199125104858 L130 -F137 0.0461280744077461 F137 -L151 0.0461280744077461 F132 -Q169 0.042665876039031 S154 -M161 0.0404666659518256 I129 -N162 0.0398681981499613 Y152 -N157 0.0395328338396206 G142 -V150 0.0391960172631691 I139 -V150 0.0364273153339694 V146 -S155 0.0358792549886108 S141 -L149 0.0324432515195403 N162 -Q169 0.0321039153557692 F132 -P164 0.0290218661120543 I153 -V160 0.0282069187734511 I139 -V146 0.027936142949947 R163 -E168 0.0264841328845469 V133 -E168 0.0263669088078339 F138 -L151 0.0257256843571332 I129 -F137 0.0249075189192371 I139 -S144 0.0220785493409688 F137 -L143 0.0212657989332907 S154 -E159 0.0206790399500898 V146 -I156 0.0199944553311724 L130 -N162 0.0199080014987683 F137 -I156 0.0190700898216944 V150 -E159 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