[Mon Aug 29 17:27:27 2016] >Input file: TMQ03817M1G.pdb >TM segments: 371-396 MAIDEN score = -0.2203 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- F386 -L392 0.730727739701412 F386 -G391 0.707250982084834 D383 -C393 0.61729540142237 F386 -A395 0.535659600435855 R380 -L385 0.417273890535377 W387 -L392 0.413780018881736 R380 -C393 0.381731462582575 R379 -L384 0.355945380850646 Q389 -K394 0.335623666940706 R379 -L392 0.33543948337817 Q389 -A395 0.261294133566254 Q373 -N378 0.244162212236376 Y374 -R379 0.234872652894185 N378 -L384 0.191247847863223 D383 -G390 0.183280268515879 R380 -W387 0.182706724700279 L385 -K394 0.180494708178137 L382 -L392 0.172369552037246 L382 -C393 0.164159952961161 A372 -G381 0.161741420065452 G390 -A395 0.157517284224592 R379 -Q389 0.153776363824922 L382 -K394 0.153231347480995 R380 -Q389 0.151590782385308 A372 -R380 0.149289474849921 R379 -A395 0.146210529597296 N378 -L392 0.127093031766552 G381 -G390 0.12351911052719 R379 -W387 0.122024637410033 L385 -L396 0.119476881221592 L385 -A395 0.118584485056488 G381 -E388 0.117862312633851 G381 -A395 0.116339904235632 A376 -L385 0.111153934242715 Q377 -L382 0.106548195123261 Q373 -R380 0.103899269845451 I371 -Q377 0.103054155063789 F386 -C393 0.1022936204512 L384 -A395 0.0950658232128792 Q377 -L392 0.0925897863084917 L384 -L396 0.0910571976316206 A376 -D383 0.079154866469902 F386 -K394 0.0749574547574126 L384 -K394 0.074283317618475 G381 -G391 0.0694963177890429 L382 -W387 0.0632501909877021 E388 -K394 0.059230976908224 A375 -L392 0.0586119816857682 N378 -G391 0.0547876397256801 A376 -L384 0.0541284581489849 L384 -G391 0.054062195149422 A376 -L396 0.0502122375310421 I371 -R379 0.0489577595178541 R379 -L396 0.0433092258897125 G381 -W387 0.0398802810741223 A376 -L392 0.0360996167842584 A372 -Q377 0.0335266963002452 G381 -L396 0.0247786020459211 L382 -A395 0.0214241128558559 A375 -L384 0.0213587610313795 R380 -A395 0.0166716665730391 Q373 -L382 0.014250746788834 I371 -A376 0.0109104652787924 R380 -G391 0.0100108006225056 I371 -N378 0.0095762691070238 D383 -A395 0.00113248341466043 L382 -G390 -0.000860400970073893 R379 -G391 -0.00210559527016185 A376 -F386 -0.00937619558072278 G381 -Q389 -0.0102792441092001 R380 -G390 -0.0113959639589742 A375 -D383 -0.0116081759294286 Q377 -L384 -0.0183207353326862 L382 -L396 -0.0248496078218883 L382 -Q389 -0.0253716767431309 Y374 -L382 -0.032157520514609 R380 -E388 -0.0339989460027135 N378 -F386 -0.0377695064309078 L384 -C393 -0.0454491533599661 A375 -R380 -0.0456255941519652 L382 -E388 -0.0506481039385269 D383 -G391 -0.053912589052485 Q377 -L385 -0.0631726714226467 Q377 -D383 -0.0729010908328516 A375 -G381 -0.0761909031678564 Q373 -G381 -0.0774622531050291 D383 -Q389 -0.0795881814251993 E388 -L396 -0.086147195862357 A372 -N378 -0.0887285566856456 N378 -D383 -0.0945210922324956 Y374 -G381 -0.0948069962176907 Y374 -R380 -0.0970338019664202 R380 -L396 -0.0997349602557298 Q377 -F386 -0.103589022513285 G381 -C393 -0.105226352300578 L384 -G390 -0.111544589370375 W387 -A395 -0.117598999260005 L382 -G391 -0.119498490277717 D383 -E388 -0.119634023189203 L385 -G391 -0.122141644369362 R380 -F386 -0.125408944395605 D383 -L392 -0.132031663862617 G381 -L392 -0.13335569828096 Q373 -R379 -0.136402852919258 A376 -G381 -0.15060960501573 D383 -K394 -0.154736437974811 R379 -K394 -0.158383850440756 L385 -C393 -0.161566919718836 Q389 -L396 -0.161578981101145 A372 -R379 -0.164669062156198 I371 -R380 -0.171634683086713 G390 -L396 -0.175782295652657 R379 -F386 -0.190562505756011 R379 -L385 -0.191757924036398 G381 -F386 -0.217982938789402 L385 -L392 -0.219072852023208 R379 -C393 -0.223466099064892 N378 -L385 -0.223482398364409 W387 -L396 -0.243363104257329 Y374 -D383 -0.248882352810005 A375 -L382 -0.252903719093897 N378 -W387 -0.257032402178082 D383 -L396 -0.262448286804931 F386 -L396 -0.26533020503792 E388 -A395 -0.283491963430436 R380 -L392 -0.28578599066659 W387 -K394 -0.289542900775289 A376 -L382 -0.30379396250145 L385 -G390 -0.325816772522582 L384 -L392 -0.348256083022542 G391 -L396 -0.42007744624114 W387 -C393 -0.486498113517487 L384 -Q389 -0.501479980426124 E388 -C393 -0.603188911718839