[Wed Nov 23 03:59:51 2016] >Input file: TMQ06432E16D.pdb >TM segments: 106-134_ 139-158 MAIDEN score = 2.9630 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K132 -M142 10 I151 -E156 1.20532153714023 L129 -D134 1.17134704489388 L120 -V125 1.169151365773 V125 -R133 0.82787098651901 L127 -D134 0.753789215302342 L126 -D134 0.730056199229785 I119 -Y144 0.6960222982311 V125 -K132 0.654626126079723 F113 -I118 0.651168072181281 L120 -M142 0.650915584424434 F113 -G148 0.627050981854751 F117 -A147 0.523426385050948 F117 -A145 0.495163403818077 L120 -S141 0.493999837898524 I118 -Y144 0.483252487910757 K131 -M142 0.463220622514628 S114 -A147 0.454585865126447 L126 -R133 0.436639310198092 I119 -C124 0.413522499459464 V125 -D134 0.374312906520272 S114 -L152 0.364359191860331 R133 -M142 0.335059866829416 I112 -F117 0.329357719933367 K132 -F143 0.326330032103384 C124 -F146 0.32470122636015 K132 -A147 0.316854490714234 S122 -A140 0.316219369275823 K131 -P139 0.315258997297973 L152 -V157 0.309318746795862 G121 -Y144 0.305522737695626 I119 -V125 0.304098693932992 A140 -A147 0.279106962954192 L115 -G148 0.277238381607878 G121 -G130 0.270921541919821 G121 -R133 0.270877969346803 G121 -D134 0.27060393280006 A111 -G116 0.270505675129345 R133 -A145 0.263926850615627 L126 -K131 0.262131401466979 G148 -E156 0.244658676086054 L120 -A145 0.229086763012243 K131 -Y144 0.223978442252654 S114 -S141 0.207872366173212 V125 -F143 0.203994613702343 I110 -G116 0.19642234609504 F117 -Y144 0.192873877367427 A111 -A147 0.186739682744145 F117 -F143 0.180984558373652 F117 -V125 0.177925875984484 G121 -S128 0.173309719640275 S114 -V153 0.172946678755679 G116 -L123 0.168492901185494 I118 -G148 0.167086523313936 S141 -G148 0.166681150948373 L120 -P139 0.165509822109573 G130 -A145 0.164915197987653 I119 -A147 0.162652700737298 K132 -A140 0.162515473831601 S122 -P139 0.161694761256921 S122 -F143 0.158108886825314 G116 -L152 0.152632089125881 L126 -K132 0.15253997337427 G116 -G121 0.151779342517358 A108 -I151 0.150295979187621 A111 -I119 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