[Fri Aug 26 17:41:12 2016] >Input file: TMQ0G681M1D.pdb >TM segments: 285-304_ 453-469 MAIDEN score = -4.0398 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K454 -M459 1.34135288642218 S303 -S456 0.506010431664869 D458 -F463 0.466659629097595 A300 -R464 0.39574583020042 S303 -R460 0.392425308538756 A304 -T455 0.352587279306073 R286 -L291 0.338209639362951 R460 -L465 0.336871325937497 K299 -R460 0.33034384194745 S303 -K454 0.306227852017904 K299 -R464 0.30156024613626 S303 -H461 0.300982718111074 A304 -A457 0.272929879956107 K299 -H461 0.261733421442452 A304 -S456 0.241065118502088 G295 -F301 0.208961416782091 M459 -V467 0.198276266540739 L462 -V467 0.193471088990552 P453 -H461 0.190345637151213 S288 -M294 0.18700391734579 S296 -N466 0.184571345739425 F292 -T297 0.181606665354134 M294 -K299 0.170688291816066 S296 -R464 0.167478340844534 F301 -T455 0.16214484214507 A304 -R464 0.160485825777513 G290 -G295 0.158325678201389 F298 -S456 0.150360534856085 A300 -D458 0.138042488408315 A300 -N466 0.130256869154959 M294 -A300 0.127563737082492 T297 -S303 0.125213640129367 T455 -R460 0.118656306652141 F298 -F463 0.117228932063879 F301 -S456 0.115218900352888 S296 -V467 0.112725754388977 R286 -E293 0.111647700503474 M294 -S303 0.106605531118844 A300 -T455 0.101154869123336 G295 -T302 0.0983373007416041 A300 -P453 0.0910580986403806 S303 -D458 0.0907719245033016 S303 -N466 0.0862058049451244 K454 -F463 0.0821765606738829 S303 -R464 0.080835335413729 S456 -R464 0.0780187437096967 F301 -L462 0.0738816917749516 E293 -F298 0.0679908950343648 T302 -R464 0.0653028462431279 M294 -T302 0.0651598765467846 F301 -P453 0.0632370058226234 T455 -R464 0.0627181247546642 S296 -S303 0.0603918415619099 T297 -R460 0.0597525140138467 T297 -F463 0.0589406623082049 A300 -V467 0.0574878219219999 G295 -A300 0.0523385376681125 S303 -P453 0.0499262665205684 A300 -L465 0.0484633493743021 F301 -L465 0.0461280744077461 A289 -M294 0.0440615026327493 A457 -L465 0.0439371176991079 K299 -T455 0.0428700166825773 F301 -F463 0.0407281794335921 K299 -A457 0.0404561678374851 R460 -V467 0.0371810220274025 G295 -S303 0.0356626368398691 T297 -A304 0.0355829366536131 T297 -H461 0.0355487746035497 K299 -S456 0.0336324495420031 H461 -E468 0.0321226835725188 K299 -V467 0.0319219522592899 S303 -L462 0.0315090510380207 T297 -V467 0.0311046328238653 F301 -R464 0.0290590201228425 R286 -F292 0.0280178311468902 S296 -F463 0.0255308693336698 K299 -A304 0.0239590283794229 T302 -F463 0.0232584527804719 P453 -F463 0.00989702960133454 F292 -F298 0.00167795764272061 L291 -T297 -0.00181723223891783 T302 -H461 -0.00445245930589611 S288 -E293 -0.00820317317939717 S296 -E468 -0.00841756724691273 F298 -R460 -0.0103881314110471 F298 -R464 -0.0109661268603743 T302 -M459 -0.011363534633885 F463 -E468 -0.0116385759053319 T455 -L465 -0.0119801075884904 N285 -F292 -0.0158829928153761 S303 -L465 -0.0166823801997609 T297 -S456 -0.0183629342133305 M294 -F301 -0.0191448945628063 T287 -M294 -0.0199988228268901 F301 -H461 -0.0219355293014392 A304 -R460 -0.0300720316831118 S456 -H461 -0.0306599281748587 F301 -V467 -0.0357135343942039 F298 -A457 -0.0377063013085603 S296 -A304 -0.0385398332556024 L291 -F298 -0.0401410908135826 L462 -D469 -0.0406512851685115 T302 -D458 -0.0419048971768179 E293 -A300 -0.0470565353022416 F301 -R460 -0.0473071747622598 T455 -H461 -0.0520297832870912 E293 -K299 -0.0534163036028703 S296 -R460 -0.0554005174189285 A457 -F463 -0.0628547810797303 N285 -L291 -0.0667468283908202 T302 -A457 -0.067510821111191 F298 -A304 -0.0687354193847218 A304 -L462 -0.0704784381472194 S456 -L465 -0.0737120124652932 A457 -N466 -0.073713195737404 F301 -M459 -0.0768723208292972 K454 -H461 -0.08354890733938 A300 -E468 -0.0906763394091332 S296 -F301 -0.0908847146387292 S303 -V467 -0.093419719437402 S303 -F463 -0.0935412191925782 T297 -N466 -0.0954482131230385 S456 -F463 -0.0972522668615353 D458 -N466 -0.0991152678705727 T297 -R464 -0.100318868317196 M459 -R464 -0.102758690514245 T297 -L465 -0.105106611585418 P453 -L462 -0.112513197683696 K454 -R460 -0.116192575576117 A300 -F463 -0.11697495350808 F298 -V467 -0.120355870818524 T302 -T455 -0.121505647753732 A304 -H461 -0.123088977395611 E293 -T302 -0.126132262169437 P453 -D458 -0.126591675219071 F298 -S303 -0.130169208440261 F301 -D458 -0.1313565940185 K299 -F463 -0.131836386836125 A304 -F463 -0.135530851726906 K299 -M459 -0.139518229774231 K454 -R464 -0.139995669863973 A304 -P453 -0.140135285801868 A300 -K454 -0.140432247129098 T302 -R460 -0.141091839148441 K299 -N466 -0.151810297126168 P453 -M459 -0.157033620502915 N285 -G290 -0.163757204368243 A304 -D458 -0.168164064416361 R460 -E468 -0.173790399262286 F298 -H461 -0.179583525084341 D458 -R464 -0.181671128767597 S303 -A457 -0.187622408495244 R460 -N466 -0.188746356772506 D458 -L465 -0.188778983873935 T287 -E293 -0.190847241226688 F463 -D469 -0.192010024633917 S303 -M459 -0.192608394604486 H461 -N466 -0.196538979094222 M459 -N466 -0.199096785836867 K454 -L462 -0.203123526881425 E293 -F301 -0.203946197691214 L462 -E468 -0.207274850151116 A300 -L462 -0.20851406577644 K299 -L462 -0.210074518625023 A457 -R464 -0.214888138605341 T297 -E468 -0.216254254119175 H461 -V467 -0.216803569794401 S296 -T302 -0.227470037367242 T455 -F463 -0.231801019385347 S303 -T455 -0.234546244211516 K299 -L465 -0.238366506990483 T302 -S456 -0.238503017365818 A304 -K454 -0.241996310490629 T287 -F292 -0.242454634370118 A300 -M459 -0.244923464179283 H461 -D469 -0.247711805052236 D458 -V467 -0.247761682461578 A300 -A457 -0.248330385246793 R464 -D469 -0.249648917826149 F301 -A457 -0.251648394293055 A300 -R460 -0.261087346576119 A300 -S456 -0.285795213439565 T455 -L462 -0.292250964531922 A457 -L462 -0.302804860527027 S456 -L462 -0.325992024582691 M459 -L465 -0.328287588411619 A304 -M459 -0.338328396071034 T297 -T302 -0.372430979115706 F301 -K454 -0.384205418045628 P453 -R460 -0.414602417054359 A300 -H461 -0.507581078648268