[Fri Aug 26 17:50:51 2016] >Input file: TMQ0WPW5S1D.pdb >TM segments: A247-268 MAIDEN score = 12.9541 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L247A-H257A 10 I249A-K255A 1.4163994319413 L247A-V258A 1.21599191479541 F256A-V261A 0.974536588932982 D262A-Q267A 0.681934027885053 I249A-F256A 0.669975924554216 L247A-F256A 0.582224226429051 L250A-F256A 0.495301673245891 C252A-H257A 0.471779606964239 R248A-H254A 0.450769180149741 R248A-V261A 0.44622832510131 H257A-D262A 0.413577078048174 I249A-H254A 0.35057253611856 F256A-D262A 0.296085802614018 L247A-A259A 0.292581710634743 R248A-H257A 0.229569948351819 C260A-Q267A 0.215592292426625 C252A-V261A 0.215224847596911 P251A-G266A 0.187604167832422 L247A-K255A 0.170143791390535 L250A-V261A 0.148193720290843 H254A-A259A 0.142379269078002 I249A-C260A 0.13385764923557 A259A-R268A 0.133458338330182 L250A-L263A 0.130916491283753 P251A-L265A 0.124971812766219 P251A-V258A 0.118786841647708 H257A-L265A 0.118588165745039 K255A-V261A 0.115016567150856 R248A-H253A 0.113247832802148 K255A-L265A 0.109293516635876 L247A-L263A 0.0903709040447889 I249A-L263A 0.0873708225126403 V258A-Q267A 0.0797696277273701 K255A-D262A 0.07866597492115 R248A-L263A 0.0783492617325374 A259A-G266A 0.0768719930822432 C252A-L265A 0.0733393434999448 L250A-A259A 0.0664424841736158 C252A-V258A 0.0643935000384586 H254A-C260A 0.0614439707894876 A259A-Q267A 0.0599870665713907 K255A-W264A 0.0568796951165349 R248A-F256A 0.052216575210669 H254A-V261A 0.0433948914855273 V261A-G266A 0.0424677914634319 P251A-V261A 0.0414231259440441 H253A-L265A 0.0371550968734518 P251A-F256A 0.0356686142697048 H257A-G266A 0.0280104504054244 L250A-G266A 0.026315469185938 C260A-G266A 0.0203225529679001 F256A-L265A 0.0198797433891791 L247A-H253A 0.0171810395363462 H254A-L265A 0.0138100982082422 L263A-R268A 0.0102333140272726 R248A-K255A 0.00919015061061201 R248A-W264A -0.00817335311536871 V258A-W264A -0.0225441168710283 I249A-D262A -0.0255451883786275 L247A-C252A -0.0290459785928456 P251A-D262A -0.0345233244757945 H254A-W264A -0.040589027851766 L247A-V261A -0.0433375805212499 L250A-K255A -0.0486901764923298 I249A-G266A -0.0571598450625808 F256A-G266A -0.0627229553237103 L247A-W264A -0.0652628523775016 R248A-A259A -0.0657558297097767 L247A-C260A -0.0678962453579435 D262A-R268A -0.0727313675590724 L250A-V258A -0.074176600798495 H253A-V261A -0.077626706651432 A259A-W264A -0.0802668612102831 F256A-L263A -0.0919378124654621 I249A-A259A -0.0943217828788313 I249A-W264A -0.0981223115717818 R248A-G266A -0.0998737924054698 R248A-C260A -0.108536962248159 I249A-L265A -0.117423079993306 V258A-G266A -0.125061528705721 V261A-R268A -0.126072638496901 L250A-C260A -0.131508484822656 V261A-Q267A -0.133673617799944 K255A-L263A -0.143200527577937 R248A-L265A -0.153507980524816 L247A-L265A -0.165911217117593 R248A-V258A -0.169410308082092 V258A-R268A -0.200181452143352 H253A-V258A -0.200562042466125 L247A-D262A -0.213533412585923 L250A-D262A -0.224755975719273 R248A-D262A -0.228716176517124 L250A-L265A -0.234544208904865 H254A-D262A -0.242165219984551 F256A-W264A -0.25575551150475 I249A-H257A -0.257660085954551 H257A-W264A -0.265647984877894 H257A-L263A -0.267925827429941 L247A-H254A -0.270936890784981 L250A-H257A -0.276237818259915 A259A-L265A -0.277168583841241 K255A-C260A -0.28077766999169 C260A-L265A -0.282371466270128 V258A-L265A -0.299191134712679 P251A-H257A -0.305394368794338 L250A-W264A -0.313592361263022 I249A-V258A -0.402914324562976 V258A-L263A -0.463662951124004 I249A-V261A -0.465857111665716 C260A-R268A -0.617740495776715