[Mon Aug 29 17:42:53 2016] >Input file: TMQ0WQL8M1G.pdb >TM segments: 81-99 MAIDEN score = -2.6393 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L89 -E94 0.918302512689482 F85 -C90 0.409300868956024 L87 -Y92 0.376802603605375 E86 -I91 0.294804278927382 L93 -A98 0.287489806332006 L88 -L93 0.277957140347784 L88 -E94 0.216646911912513 L82 -C90 0.179707103324751 L82 -I91 0.140855434980096 E86 -S95 0.134203486650729 A84 -Y92 0.131267198896225 L88 -Y97 0.126157086248793 L89 -Y97 0.10086654964239 L88 -S96 0.0936936562600696 A84 -L89 0.079783922755162 L81 -C90 0.0769063694669239 C90 -S95 0.070022691625812 L81 -L89 0.0675798621727228 A84 -I91 0.0672696735584708 Y92 -Y97 0.0670199309070894 L87 -S95 0.0488779117297387 A84 -L93 0.0473635839639743 L82 -L88 0.0409414114133426 V83 -Y92 0.037124375703212 L89 -A98 0.0336983189385109 F85 -E94 0.0171124408070562 Y92 -R99 0.0123617249190264 C90 -A98 -0.00852461374291447 E94 -R99 -0.0114166382649761 A84 -C90 -0.0465575975504833 V83 -I91 -0.0569337184531324 L81 -E86 -0.062657836929719 I91 -A98 -0.0733797598859169 F85 -L93 -0.0759803743649408 L89 -R99 -0.0889201877910679 Y92 -A98 -0.0905776298376139 L82 -Y92 -0.10007849754941 I91 -S96 -0.118514479669784 E86 -E94 -0.118958072880048 V83 -C90 -0.129908432255936 L87 -S96 -0.147191082754973 I91 -Y97 -0.157375154123487 F85 -Y92 -0.178968342997802 L81 -L88 -0.194780207702327 E86 -Y92 -0.203871131810983 E86 -L93 -0.205293284599803 L89 -S96 -0.20849728944071 L87 -E94 -0.210491144256142 L88 -S95 -0.213602642383694 L89 -S95 -0.219828207661982 V83 -L89 -0.226273949863594 C90 -Y97 -0.232839103267327 F85 -I91 -0.266562841234111 L93 -R99 -0.277002001375118 L82 -L87 -0.307065316958672 C90 -R99 -0.307401899464204 L81 -L87 -0.311771753223336 L87 -L93 -0.397070955294375 I91 -R99 -0.397655128194311 V83 -L88 -0.422197303023065 L82 -L89 -0.445284733287679 C90 -S96 -0.479988561568327