[Mon Aug 29 17:44:04 2016] >Input file: TMQ0YSH8M5G.pdb >TM segments: 484-511_ 594-600_ 602-609 MAIDEN score = 7.0625 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I596 -S606 10 R594 -H609 1.16885846049627 I595 -H609 1.02541007066347 V597 -V604 0.718207323026749 R594 -S606 0.616485208612556 I484 -H489 0.564354415948701 I596 -A603 0.522719471755982 N505 -I510 0.427779959464532 H489 -H507 0.416686394582228 H489 -M503 0.393231476079596 K502 -H507 0.382651357084852 G487 -I510 0.367722513306807 M499 -H507 0.364325528950745 V597 -R602 0.36152053937256 M598 -V604 0.359863948457025 G487 -E511 0.320643852841315 G490 -A504 0.317920714261142 M598 -E605 0.297938005355051 G487 -S493 0.297718235279855 I596 -V604 0.291187638210014 G487 -A504 0.288747943969589 V597 -S606 0.285531940169822 H489 -K502 0.254980379325286 G487 -A506 0.240071859392841 I595 -E605 0.238015791746841 I596 -S608 0.225918167458483 K496 -A506 0.223640561440199 Y486 -E491 0.221796988449102 Y486 -H508 0.208972753355009 Q494 -F509 0.208719204596668 I596 -G607 0.185052535051175 Y486 -S493 0.184617715687019 M598 -A603 0.184566432663742 A500 -H507 0.181534093184447 H489 -E511 0.18063390515525 G490 -I510 0.179589460045786 G487 -H508 0.169960644179201 Q494 -N505 0.169409776232641 G490 -E511 0.16727190191251 S493 -N505 0.165725630479372 G487 -M499 0.165576818264147 I492 -I510 0.165352308556278 Y486 -E511 0.163850742453468 G490 -M499 0.159146036069362 E491 -K496 0.157186036205517 S493 -A501 0.150060602419783 E491 -M503 0.148243963262868 A603 -H609 0.144786541291498 H489 -A504 0.143029629066147 M598 -S608 0.138422706862205 I488 -I510 0.136065876576725 I595 -S606 0.135048202831024 G487 -Q494 0.126228410040389 Q494 -H508 0.123336190944592 S493 -A500 0.120354571060556 E491 -M499 0.118784639359665 Y486 -H507 0.113521469815926 M503 -H508 0.111444749478114 V597 -G607 0.107329979809689 H489 -K496 0.101795289204908 H489 -E495 0.0983221008913233 A485 -H507 0.0951877584728873 E491 -H508 0.0927123498185167 A485 -A506 0.0910761037560572 I492 -N505 0.0898537715130248 V604 -H609 0.0894576553891815 R600 -E605 0.0878367137959832 H489 -M499 0.081482617868549 G487 -E495 0.0792236729425566 G490 -A500 0.0765708875816307 K502 -I510 0.0758567859268675 S493 -H507 0.0745597821793977 A506 -E511 0.0712061590156483 Q494 -H507 0.0674556944881863 G490 -H508 0.0674311184543432 I488 -A504 0.0668077146194745 E491 -E511 0.0643940195800892 I484 -S493 0.0637128174379054 Y486 -M503 0.0610192160542571 G490 -A501 0.0607298540221342 I492 -H508 0.056538075999873 G490 -A506 0.0555729900226444 E495 -M503 0.0550040426343683 I492 -F509 0.0519347286083685 I484 -I492 0.051026887907506 I498 -H507 0.0452692580333296 G487 -N505 0.0435901894319564 G487 -K502 0.0424414331031358 I498 -H508 0.0417566600055188 A500 -H508 0.0416385558223977 E491 -A506 0.0415257357556849 I488 -V497 0.0387276122955411 A485 -F509 0.0376167821720985 G490 -E495 0.037343540344958 R594 -E605 0.0369564058387271 Q494 -A500 0.0343136529323393 K502 -H508 0.030037243275995 I492 -H507 0.0295516973997474 S493 -M503 0.0278965872089705 H489 -I510 0.0275582008624475 H489 -A506 0.0265288230815552 G490 -V497 0.0263603853666527 Y486 -Q494 0.0236423534599641 K502 -E511 0.0228552435086462 I488 -N505 0.0195881290251503 E495 -A506 0.0165486326918209 I492 -A501 0.0165247668444923 S493 -F509 0.0146374287715811 H489 -Q494 0.0130949080869449 I484 -G490 0.012837045509956 I492 -M503 0.0106913076554047 I595 -G607 0.0105088847809687 Y486 -F509 0.0094961269203182 A485 -Q494 0.00812190329871648 M598 -G607 0.00693567773363002 A501 -F509 0.00603471451238224 V497 -A506 0.00330094384663093 I498 -A506 0.00296093429188422 I488 -M499 0.00274840110136765 Q494 -A504 0.000158324615825656 I596 -E605 -1.78029505143451e-06 G490 -K496 -0.00220764645625349 E495 -A500 -0.00362364347462618 Q494 -K502 -0.00579573753868923 I484 -E495 -0.00821829660751638 I492 -A504 -0.0156238852806793 S493 -M499 -0.0161052386781941 E599 -V604 -0.0161546923349811 I488 -H508 -0.0185763029003057 S493 -I498 -0.0197052622873166 G487 -M503 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-0.078257866044682 M598 -S606 -0.0795986243257263 I595 -V604 -0.0815534574965664 G490 -I498 -0.083729443716384 I595 -S608 -0.0838707941776649 A501 -I510 -0.0858088173165621 S493 -I510 -0.086433430896631 H489 -N505 -0.0910019711475378 A485 -I510 -0.0944156493793002 E491 -K502 -0.0955822900866909 H489 -F509 -0.0979473939804714 I488 -A500 -0.100820771265196 A485 -S493 -0.102061335987353 E599 -E605 -0.103867378308768 Y486 -K502 -0.104227611663338 R600 -S606 -0.109302291698191 V597 -E605 -0.110004001966291 G490 -N505 -0.11387948521209 I492 -A500 -0.113905655029891 A603 -S608 -0.115170915443364 M499 -H508 -0.115298609934746 G487 -F509 -0.118084060396312 I484 -A506 -0.118616596845012 A500 -F509 -0.121562026373567 Q494 -I510 -0.121597295687905 Y486 -A506 -0.124389120968105 H489 -H508 -0.126923215313321 V497 -F509 -0.128427161483484 G490 -K502 -0.13082505512921 A501 -H507 -0.133633703538165 K496 -A504 -0.134825818835497 N505 -E511 -0.135525409778595 E491 -V497 -0.138767076273272 V497 -A504 -0.140446690938599 A501 -H508 -0.144695309068014 K496 -N505 -0.146979284361048 H489 -V497 -0.150686824768079 I488 -A501 -0.154398298087142 E491 -A504 -0.162763592955192 G487 -H507 -0.163429808771922 M499 -N505 -0.164047855019777 I488 -E495 -0.165242862194851 I595 -R602 -0.16549758338815 I595 -A603 -0.167898403552155 E491 -I498 -0.168181038642885 K496 -M503 -0.174355375544004 I492 -V497 -0.175657219535004 I488 -H507 -0.177589495154459 M598 -H609 -0.182162564955556 G490 -M503 -0.182307724341002 V497 -N505 -0.183149843442117 G490 -H507 -0.184028316556687 V497 -K502 -0.19303746458776 E491 -I510 -0.196200207004401 I484 -E491 -0.196566289921933 S493 -A506 -0.199981672598819 M499 -A506 -0.202774739527975 A504 -I510 -0.206581128669681 Y486 -I492 -0.206825544142522 E495 -A501 -0.2165377447968 A500 -A506 -0.21856860441593 E491 -N505 -0.220119607456625 A504 -E511 -0.2246287280604 I596 -H609 -0.228812920439604 K502 -F509 -0.229716366080245 K496 -A501 -0.231753163534945 A485 -I492 -0.234837594259732 G487 -I492 -0.236300610890704 A500 -N505 -0.241432938712705 Y486 -I510 -0.247258890375298 V497 -H508 -0.252479284072133 V497 -H507 -0.260437570939451 G490 -F509 -0.265185583679214 V597 -S608 -0.27135539084526 A504 -F509 -0.275486131072197 I498 -N505 -0.296260705297273 E491 -A501 -0.298837193958171 V597 -H609 -0.313840618291992 M503 -F509 -0.318655576787166 I498 -A504 -0.329118382794946 R594 -G607 -0.330415092714215 Q494 -M503 -0.334728337300933 M499 -A504 -0.338234589324113 I488 -K502 -0.360065194888062 A501 -A506 -0.360109866335056 Q494 -M499 -0.368253151571672 I488 -M503 -0.37792987911322 K496 -K502 -0.384861053911165 M503 -I510 -0.39673305885007 E491 -F509 -0.399654440588601 I596 -R602 -0.402714892680204 I498 -M503 -0.405270889515259 I488 -A506 -0.448415214619136 V597 -A603 -0.452997481274075 A485 -G490 -0.456272826157899 R594 -S608 -0.477170254160754