[Mon Aug 29 17:45:33 2016] >Input file: TMQ0YUS3M2G.pdb >TM segments: 378-398_ 496-503_ 511-525_ 527-533 MAIDEN score = -2.4268 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V498 -A531 1.82182346102559 L497 -I530 1.50780432370926 L496 -I530 1.21912846639606 I382 -V498 0.992335521453574 L499 -H532 0.845336838698858 L385 -I396 0.819341241937976 V498 -I530 0.793993735111016 I382 -D500 0.786251740164236 L384 -Q389 0.703613208668544 L514 -L519 0.682427692764609 K523 -I530 0.678824610813381 L497 -V529 0.649446556191123 L497 -V528 0.630995267880396 L496 -V528 0.626891698166678 L496 -V529 0.624782956499764 I518 -K523 0.550072585341075 L384 -P391 0.54483076919696 K523 -V529 0.530116057135678 L499 -R533 0.489959883913 L499 -I530 0.477767170904974 S517 -M522 0.470698981786007 M522 -T527 0.468277690642475 L386 -V498 0.408493361074912 D500 -A531 0.400694201077208 K378 -E501 0.389746659914993 T503 -L514 0.35820285000518 P391 -T397 0.290838757375699 L496 -A531 0.289391159960331 R515 -L521 0.278157285016186 S379 -A531 0.252350922333903 R515 -K523 0.250953972510388 R387 -M398 0.248489808553227 Q389 -G394 0.246988709540182 L496 -H532 0.240295281402548 L384 -T397 0.237506219417208 I518 -R525 0.229899506534494 M398 -V498 0.209317030677473 N383 -F388 0.198653475266092 E520 -A531 0.197198386985103 I382 -T397 0.196127157101973 R387 -V498 0.193400890817866 T380 -I396 0.191923152405079 T380 -A392 0.187076718892086 L499 -M522 0.18506223656131 L499 -K523 0.184304346941174 E501 -R533 0.184189231302204 N383 -S393 0.1839348403368 T503 -A531 0.182731045485439 S379 -L499 0.179732162540521 L497 -G524 0.176852895602464 E511 -H532 0.176053547268377 I382 -L499 0.174529780289479 L514 -K523 0.164704198420378 N383 -I396 0.156705998881603 N383 -L496 0.153085168014052 T380 -P391 0.151773139936362 I518 -G524 0.146885294930504 E501 -I530 0.146843413590739 N383 -D500 0.146768435577429 S516 -R525 0.144110675190582 L381 -Q389 0.139262397804348 L386 -T397 0.138939001104122 T380 -A531 0.136066946845091 K378 -R533 0.135559859983505 R387 -G394 0.135163530565353 L384 -I396 0.134908824377038 I382 -I396 0.133762320908189 M398 -V528 0.129901432062944 N383 -E501 0.129572295625813 L385 -G394 0.124739175348019 P502 -A512 0.123655262792664 D500 -R533 0.122338645536233 R515 -A531 0.121188679179144 L497 -P502 0.11971569757087 I518 -I530 0.119219726849475 S516 -L521 0.11856916089557 T380 -L386 0.11761244733276 R387 -T397 0.117297796934293 L386 -A531 0.115018662392572 L384 -S393 0.114524716925724 R387 -A392 0.113855515898355 R515 -E520 0.113583474497357 P502 -H532 0.113403641914851 L385 -S395 0.112463291007057 T503 -S517 0.109795865384988 I518 -V528 0.109758371019915 S379 -R387 0.109737694273078 L496 -L519 0.108619937115551 R387 -I396 0.108053676479273 L386 -P391 0.105647750891086 K378 -L386 0.101262141148124 L384 -L496 0.101094934626897 T380 -V498 0.100767417351324 S379 -E390 0.100077302931719 F388 -S395 0.0999944547968958 E511 -R533 0.0997823353727363 E520 -H532 0.0977443111833382 L497 -A531 0.0975714141344106 L385 -E390 0.0947623343870827 L381 -A392 0.0946989542326948 L384 -A531 0.0942935980072334 S379 -H532 0.0935201017752272 L384 -L497 0.0934321407351397 L385 -V529 0.0933044593785877 I396 -L497 0.0929478152600698 I382 -Q389 0.0926890579176431 L499 -A531 0.0926562733963134 L381 -L497 0.0908548779527605 T397 -V498 0.0908531544792335 R515 -R533 0.0900401556503828 E511 -M522 0.0897715571385939 L497 -M522 0.0895239860998849 E390 -M398 0.0894700588057624 L499 -L514 0.0880650050423488 L496 -M522 0.0875454108091676 L514 -R533 0.0861299661701557 R387 -L497 0.0860698766358886 S517 -T527 0.0859810772663017 A513 -M522 0.0830052757947447 L381 -H532 0.080066318046689 N383 -A531 0.0797646851854332 K378 -D500 0.0796090719340411 L384 -L499 0.0761864686441478 A512 -R533 0.075601589223707 L521 -A531 0.0753533714060888 S379 -R533 0.0752170903554779 S379 -T503 0.0714201721285979 L497 -E520 0.0709972653951393 E511 -E520 0.0674693742966928 S516 -H532 0.0674341396461097 L381 -G394 0.0666886535914539 N383 -T397 0.0661877046598605 I518 -H532 0.0652463979766837 L386 -D500 0.0615450988917816 R387 -A531 0.0613494508598196 V498 -M522 0.0590515243034897 L385 -D500 0.0584174169325022 N383 -S395 0.0577003459869119 I382 -I530 0.0576871230254463 R387 -S395 0.0576358901578078 L499 -V529 0.057544716758172 I518 -V529 0.0549167882139159 F388 -L496 0.0548900230990741 R515 -I530 0.049449668378942 N383 -G394 0.0435781530869832 L385 -A392 0.0424113865192584 E501 -R515 0.0420085608959382 Q389 -T397 0.0415377375333817 G524 -H532 0.0413712922280203 K378 -T503 0.0413006817118416 I382 -P391 0.039576964044294 L497 -R525 0.0394231052091696 I382 -P502 0.039129294605043 T380 -E501 0.0382441196040491 L519 -T527 0.0368968152368119 T503 -S516 0.0362168051492344 D500 -L519 0.035627098922806 T397 -A531 0.0323152145012003 L514 -I530 0.0316018016482147 V498 -K523 0.030512347044809 L381 -S395 0.0296754269936892 N383 -A392 0.0282688709559098 L386 -S395 0.0282262527847429 L381 -E501 0.0279888920338429 V498 -T503 0.0279797891411513 R515 -G524 0.0265371650292554 R525 -I530 0.0258721484657012 T397 -V529 0.0242371072475631 L381 -T397 0.023536124595843 S379 -P502 0.0214740664377526 I518 -A531 0.0212740020951756 L386 -G394 0.0203884263847778 L385 -H532 0.0201244707989877 K378 -Q389 0.0197037314377715 L386 -M398 0.0196024574074478 L386 -L497 0.0180728186764476 P502 -I518 0.0175391718377895 E520 -V529 0.0148730260835528 M398 -A531 0.0124245050339833 L521 -T527 0.0123391144635718 T380 -G394 0.0115120587490889 F388 -D500 0.010980421655379 L386 -L496 0.0104321465510306 L384 -H532 0.00937304764016744 L514 -H532 0.00905538485489506 Q389 -V498 0.00808250377930586 D500 -I530 0.00774164212476247 F388 -G394 0.00537491146363278 L381 -I530 0.00473996545380473 V498 -H532 0.00461524027663751 L497 -T503 0.00438218066785145 E501 -L519 0.00433429545405906 T397 -L497 0.00430191859787599 L497 -K523 0.00390968229437938 E511 -S516 0.00294352165632183 P502 -I530 0.000589881673780379 S516 -T527 -0.000479690738506733 L384 -S395 -0.000999481907017596 I382 -R387 -0.00117396080608789 I382 -S395 -0.00461599956080327 K378 -F388 -0.00626851580958565 P502 -M522 -0.0063491568877021 R515 -R525 -0.00753838777078797 L385 -L499 -0.00831113398003636 G524 -V529 -0.0094699343236444 L384 -D500 -0.00948037764710952 A513 -L519 -0.00992103306230607 T503 -E511 -0.0100143555868741 A512 -I518 -0.0109581035719479 E501 -L514 -0.0126119306929122 T503 -I530 -0.0129918806701941 A512 -L521 -0.0134221349630987 A512 -H532 -0.0139157877893279 M522 -A531 -0.0139397088926685 Q389 -I396 -0.0161534514646027 F388 -T397 -0.0162333152331575 S517 -H532 -0.0167214717822994 P502 -A513 -0.018121781203474 F388 -S393 -0.0183648704102737 V498 -I518 -0.0225091304209375 T380 -S395 -0.0230446543049831 M398 -V529 -0.0246547712611129 I396 -A531 -0.0254652306609255 L381 -R533 -0.0260180331995459 L519 -R533 -0.0267538345509193 L496 -G524 -0.0280694607352916 S516 -V528 -0.0281974672388907 Q389 -S395 -0.0309807734519856 T380 -S393 -0.0324625356208283 I382 -R533 -0.0325672810029515 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