[Mon Aug 29 17:53:04 2016] >Input file: TMQ12XJ7S1G.pdb >TM segments: 443-449_ 543-551_ 589-608 MAIDEN score = 5.5094 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D544 -T593 8.489202561713 V545 -T593 1.42190388470701 V545 -I594 0.868566231057139 P590 -E599 0.478790742266029 I598 -K607 0.407574057934194 L546 -T592 0.371923014304904 V591 -E596 0.339688554170852 V545 -V591 0.291606971228577 T592 -E599 0.243104394183565 V591 -V597 0.233715341520742 I598 -V603 0.212919449714728 L546 -P590 0.211684758609577 L546 -V591 0.211080440053982 P590 -H600 0.205852955455685 T593 -H600 0.205220266359251 G543 -V591 0.201770133322633 I443 -A551 0.183269003382488 I594 -H600 0.171234762328272 V545 -V597 0.170463487154656 G543 -A595 0.162410355804009 I589 -A595 0.150321218972097 A595 -A608 0.145563574116343 D544 -P590 0.132751283629793 S601 -K607 0.121445798838397 I443 -G549 0.119940245278877 A551 -P590 0.119712039876786 I548 -T592 0.100588898384165 L445 -I548 0.0934374538917715 E599 -D606 0.0908618671875296 S601 -A608 0.087316691551762 I589 -L602 0.0834133863975612 A595 -S601 0.0765901188736793 I548 -I594 0.0746639096382837 P590 -V597 0.0701728783784347 P590 -A595 0.0646531707284517 L546 -A595 0.059620263826204 D544 -A595 0.0527702648043555 A595 -G604 0.048645850953831 L546 -E596 0.0418233310932399 P590 -I598 0.04176340302547 H600 -A608 0.0415517027011065 P547 -I594 0.0414470069804117 I548 -V591 0.0399999835844831 G543 -I598 0.0358495921245403 V597 -K607 0.0324058748561135 V591 -H600 0.0301679601190337 L602 -A608 0.0283539685258285 A595 -H600 0.0282950109367555 V444 -G549 0.0255315574751771 E596 -K607 0.0216750017475436 L445 -G550 0.0197291697985289 L445 -A551 0.0107281536149104 V444 -G550 0.0105951041470806 T593 -I598 0.00767004913915681 G543 -E599 0.00636330149574182 E599 -A608 -0.00376058942692126 V545 -T592 -0.0080994463815145 E596 -L602 -0.0100658110745127 I548 -P590 -0.0123328187430932 V444 -A551 -0.0143164326881879 P547 -T592 -0.0162534244251576 D544 -I594 -0.0162577794419914 P547 -I589 -0.0163132993777064 V591 -S601 -0.0205693377311236 V545 -P590 -0.0210608291047558 V545 -A551 -0.0214409235951025 V597 -G604 -0.0218362091113251 A551 -V591 -0.026047751709652 D544 -I589 -0.0297237460674369 V597 -V603 -0.0410269971170747 I548 -T593 -0.041838068476182 G549 -P590 -0.0420664543571383 L546 -V597 -0.0475947461885653 I594 -S601 -0.0485445412136425 A595 -E605 -0.0509921843916339 T592 -H600 -0.0511369811612381 V603 -A608 -0.0528931915795958 V597 -A608 -0.0565443934523775 A551 -I589 -0.0574259761708946 I589 -V597 -0.059858534663439 T593 -E599 -0.0598772810155257 E596 -G604 -0.0612312631363423 L546 -I589 -0.0631996149666687 E596 -A608 -0.0669828137176857 E596 -S601 -0.0702092815455853 G543 -I594 -0.071384125993406 L546 -A551 -0.0729842432842633 P547 -V597 -0.0736404860453923 G543 -P590 -0.0845547239055285 H600 -D606 -0.0853170836786692 I589 -E596 -0.0856993852338856 G550 -P590 -0.0896987771682338 E599 -K607 -0.0901634548372265 I598 -E605 -0.0930659327543326 P547 -T593 -0.0933103471894183 D544 -I598 -0.0968059360816227 H600 -E605 -0.0981211505077342 D544 -V591 -0.100845827062372 V545 -E596 -0.104533327262766 I589 -S601 -0.104860364698681 D544 -E596 -0.107099564680502 I548 -I589 -0.11308382269999 I594 -K607 -0.117112035482523 D544 -T592 -0.117951653810082 V545 -I598 -0.129966196338257 G543 -V597 -0.130133397612949 I598 -A608 -0.137901812105536 T592 -I598 -0.141365055928044 P590 -E596 -0.141624451993203 I598 -D606 -0.141831930881579 V597 -L602 -0.143874445043872 I443 -I548 -0.149623908096227 A595 -L602 -0.158665183092193 P547 -V591 -0.162683647460475 V545 -I589 -0.164193290542118 P590 -S601 -0.170336418739751 A595 -D606 -0.172592994633697 I589 -E599 -0.176359530925918 V591 -I598 -0.179446657937804 T592 -V597 -0.189178622435977 V545 -E599 -0.191786137638548 E596 -V603 -0.19285114858465 I589 -I594 -0.193020057808026 E599 -G604 -0.195590034015121 D544 -V597 -0.199082030245633 E599 -E605 -0.199692354613922 G543 -E596 -0.201062943537797 I594 -E599 -0.204819194331452 D544 -E599 -0.206065583313992 I589 -H600 -0.214362174125648 L602 -K607 -0.231976129039821 I589 -I598 -0.232403785963202 G543 -T592 -0.259439060297479 I598 -G604 -0.26077429646952 P547 -E596 -0.264487025516915 H600 -K607 -0.294703824670351 I443 -G550 -0.298574535827503 V591 -E599 -0.305454992466089 V545 -A595 -0.314297650678228 G543 -T593 -0.31777768601569 L546 -T593 -0.334754464305182 A595 -K607 -0.353853738081304 L546 -I594 -0.383215735748737 P547 -P590 -0.479417589438631