[Fri Aug 26 16:25:49 2016] >Input file: TMQ14DG7M1D.pdb >TM segments: 51-58_ 62-76 MAIDEN score = -0.1419 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A56 -R62 1.06064102308286 K54 -L66 0.777716606095251 V70 -I75 0.57606893523577 Q67 -Y76 0.47268691188191 A56 -N63 0.46263137920532 N57 -R62 0.259217153316852 L66 -P72 0.228496521021196 E55 -R62 0.20450120358111 Q67 -P72 0.201981624490652 E71 -Y76 0.176634846090882 Q58 -N63 0.152980814502454 F51 -F74 0.150583744170338 K54 -R62 0.148595948206391 L66 -Y76 0.126685488680132 F52 -Q67 0.123993998931296 S65 -F74 0.10730079443871 Q67 -F73 0.107128914131266 K54 -N63 0.104822415067837 F52 -F74 0.092920022565651 N57 -S65 0.0743808720918047 F51 -I75 0.0648779861507812 F51 -L66 0.0624074605204439 F52 -Y76 0.0401856302648049 Q58 -S65 0.0229709682999097 E55 -N63 0.0198852636509574 F51 -Y76 0.0191865608112414 L66 -F73 0.0187887081089961 A56 -L66 0.0169438090468352 E55 -Q67 0.0153596540166605 K54 -Q67 0.0122326763377929 A56 -Q67 0.00944204216231825 L53 -I75 0.00758409500723367 F52 -S64 0.00563458363719183 A68 -F73 -0.0100255154360362 S65 -E71 -0.0101877153238869 L66 -E71 -0.0110283092682355 F52 -S65 -0.0178173023808261 F52 -F73 -0.0327157539341938 N63 -A68 -0.0342490214251074 L53 -Q67 -0.0524481687260643 A56 -S64 -0.0568725937754428 E55 -S65 -0.0727611723453769 Q67 -I75 -0.0740111793796654 K54 -F74 -0.0771969486673516 Q58 -S64 -0.0790955542159751 L66 -F74 -0.0796818926768221 S64 -R69 -0.081671718249622 R69 -Y76 -0.0839981806828254 A68 -I75 -0.0914883310894604 R69 -F74 -0.097469313458999 E55 -L66 -0.0991723383955057 S65 -I75 -0.099405572539828 F52 -I75 -0.104193546241846 S64 -V70 -0.109149623490648 K54 -I75 -0.110215564826582 L53 -F74 -0.118668339137344 K54 -A68 -0.135271791268479 F52 -V70 -0.138872921894594 E55 -S64 -0.159120653644071 K54 -S65 -0.170914586899391 A68 -F74 -0.177486759344849 L53 -S65 -0.182807176476659 L53 -S64 -0.188079188434127 L53 -N63 -0.191787602805742 F52 -L66 -0.19317511549151 N57 -N63 -0.204659667087252 V70 -Y76 -0.206194576093822 S65 -V70 -0.215991601536334 K54 -S64 -0.247821367874738 Q67 -F74 -0.274647761023628 A56 -S65 -0.276057709621814 N57 -S64 -0.320894661981286 R69 -I75 -0.380816589796355 L53 -L66 -0.381604983067774 L66 -I75 -0.417621624689709