[Mon Aug 29 16:43:10 2016] >Input file: TMQ14PE8M1G.pdb >TM segments: 143-148_ 277-294 MAIDEN score = 20.0390 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I146 -K292 10 L147 -P290 1.19696608497973 A277 -P290 0.957933436184077 V148 -L289 0.935094501444311 I146 -L289 0.809987349265066 V148 -Y291 0.79882448617861 I146 -V293 0.79181921068666 L147 -L289 0.730550383294537 D143 -V293 0.712654479579168 A277 -P287 0.618658963067515 V148 -E288 0.548525503532772 Y144 -V294 0.526277057149449 I280 -P287 0.461439117334663 I280 -K286 0.459073724978032 I146 -P290 0.452771212669524 A277 -E288 0.418342897241308 V148 -S278 0.413387285045696 I145 -V293 0.399702819769997 V279 -P287 0.385705704628998 S278 -A285 0.304691226381901 Y144 -P290 0.301465078252742 V279 -E288 0.297630624828729 K282 -P287 0.293350795517216 S278 -L289 0.267839992656107 S281 -P287 0.229420615921132 Y144 -V293 0.211397245839514 L147 -E288 0.200607522847878 A277 -K282 0.184234138786529 I146 -Y291 0.159360170463144 L147 -P287 0.149819260250695 V279 -P290 0.135281167895799 I145 -V294 0.123389206721884 Y144 -E288 0.107970320958124 A277 -L289 0.101665962587314 Y144 -Y291 0.0954377651195113 V148 -A277 0.0901252168357978 V279 -Y291 0.0887029803785289 A277 -A285 0.088190915936786 V148 -K286 0.0853682074531039 L147 -V279 0.0826673412781138 L289 -V294 0.0823291166238884 S281 -E288 0.0813701248077954 V279 -A285 0.078641368609321 L147 -V293 0.0699530603645631 V279 -K286 0.0663673983600321 I280 -P290 0.0645385553477271 V148 -P290 0.0611112925203381 V148 -V294 0.0594207844420325 V279 -S284 0.0476922040734529 E288 -V293 0.0438013132587742 K282 -E288 0.0427817655635643 I145 -P290 0.0414023765288372 I146 -A277 0.0412614658314148 A285 -P290 0.0402706826054864 I146 -P287 0.0347686196069608 S278 -G283 0.0300115575976392 I145 -E288 0.0282707270381803 I146 -S278 0.0234532349044105 V148 -I280 0.0167975860488649 S278 -K292 0.011556551334289 L147 -K292 0.0102687055046902 S284 -L289 -0.00082862365243588 E288 -V294 -0.00546182602744372 V148 -V279 -0.0064858415906528 A277 -K292 -0.00843975946155506 P287 -K292 -0.0144091932152026 S278 -Y291 -0.0316067302354721 S278 -V293 -0.0337728727733335 V279 -L289 -0.0350478640731477 S278 -E288 -0.0353313067496022 L147 -A277 -0.0376666141188422 V148 -P287 -0.0422160410177774 S278 -P290 -0.0487019372035391 V148 -K292 -0.0539376981640105 I146 -E288 -0.0586288572210087 I280 -Y291 -0.0683189833560471 S281 -L289 -0.0693356919145991 S278 -S284 -0.0706799582714839 G283 -E288 -0.0766065666466895 A277 -K286 -0.0789792519181396 A277 -S284 -0.0846795267483342 I280 -L289 -0.085318646882708 A277 -Y291 -0.0874123511373487 S278 -K286 -0.0923972013468179 V148 -V293 -0.097722466876847 Y144 -L289 -0.104677619674181 K286 -Y291 -0.142852775370898 V279 -K292 -0.15594990427405 S281 -P290 -0.172331675760691 D143 -K292 -0.177008477945306 S281 -K286 -0.182221391165371 D143 -Y291 -0.195490438052521 I280 -E288 -0.196136646257121 I145 -Y291 -0.207693759269402 Y144 -K292 -0.208630696649529 I146 -V294 -0.210102707203639 L147 -V294 -0.231043660612622 D143 -V294 -0.235182129491815 I280 -A285 -0.297133744660399 K286 -K292 -0.319603696017161 L147 -S278 -0.32089363782051 I145 -K292 -0.344046430530058 I145 -L289 -0.361921091999976 L147 -Y291 -0.376209451893608 S278 -P287 -0.490257995157572