[Mon Aug 29 16:50:09 2016] >Input file: TMQ1JNC8M1G.pdb >TM segments: 377-428 MAIDEN score = 23.1294 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I407 -D425 10 I409 -V423 10 S412 -V421 2.21439232125983 K405 -K426 1.98125148502712 V413 -I420 1.43900862262451 S412 -I420 1.14772765238289 V398 -D425 0.986819621478426 L411 -V421 0.921984020738734 K406 -K426 0.845641045567309 T414 -A419 0.777432686527803 L393 -V423 0.718499791899502 S412 -R422 0.643067113014956 I381 -F386 0.642401014413308 G415 -I420 0.607503051239565 S401 -I407 0.573380635689857 I407 -V423 0.572460613637566 Y400 -D425 0.565959687309899 I409 -V421 0.554236420139718 L390 -D395 0.551808289578881 I394 -V423 0.549435044143735 Y400 -K426 0.540050013491784 N410 -I420 0.508674255741148 K405 -G427 0.479670766535267 L411 -I420 0.477069352160399 R402 -G427 0.462736617997136 A397 -V423 0.455542438414225 A397 -I407 0.454146904626793 A397 -K426 0.430952456705567 K399 -Q424 0.402448106658698 K399 -K426 0.401057093315171 E404 -K426 0.387896434552219 K403 -K426 0.358810105111887 T377 -S412 0.353208279425343 A397 -Q424 0.350697179656925 N396 -K426 0.344659064107974 V398 -I407 0.328748046160357 D395 -R402 0.307956985662146 Y400 -E428 0.304342190755507 T414 -I420 0.297697879265099 M391 -R422 0.286798426878589 T377 -A419 0.282236260833644 I409 -Q424 0.272304423373361 A408 -R422 0.268234234373268 A397 -R422 0.259938731913932 L411 -V423 0.25462278645801 D395 -Y400 0.247085705120515 V413 -R422 0.246711539371 M391 -D425 0.241898907488075 Q388 -R422 0.238319134671589 S412 -Q424 0.235707101333779 K399 -K405 0.232752057285268 N410 -G415 0.230888408347173 D395 -K406 0.227894525856723 I394 -K399 0.227286185272976 N410 -E418 0.214554477874415 V413 -E418 0.213252733225108 Y400 -K405 0.209223819566628 D395 -K403 0.206486115024898 L393 -N410 0.205372484325082 D395 -K405 0.201754555401651 K406 -Q424 0.201724983485986 R380 -E418 0.198446797298944 A397 -E404 0.193097684437677 Y382 -E387 0.192536116080955 A389 -R422 0.186327216407212 N410 -V423 0.17829841424593 V398 -K405 0.17522240417553 N396 -R422 0.174514504276266 T377 -K383 0.169178885282561 D395 -K426 0.167539378913179 I378 -G415 0.166973993800479 N396 -Q424 0.166475363334683 L390 -V421 0.166055278969534 I409 -R422 0.161472166734113 A408 -Q424 0.158508891929142 M391 -V421 0.157443150323412 V413 -V421 0.156952780274421 I392 -I409 0.154606591178107 T377 -N410 0.152186870432796 A389 -I409 0.150362561416733 A389 -I420 0.150321855348687 L393 -Q424 0.145730957298271 E404 -G427 0.139510019858925 I407 -E428 0.139035352985331 E387 -N396 0.138884929729483 A379 -N384 0.133979160489921 I394 -D425 0.133356738771352 A379 -H385 0.12614333975196 A379 -G415 0.125835221204178 A379 -A419 0.125346895110619 Q388 -L393 0.12425647973487 E387 -S412 0.123821472358765 I381 -A419 0.122257297958125 G415 -R422 0.120945576554139 L393 -A408 0.120294029377303 S401 -E428 0.117860066546432 S401 -V423 0.117835715654993 K399 -V423 0.116479578293749 K383 -Q388 0.113630140312968 N410 -Q424 0.113319061974059 L393 -L411 0.111353975001258 R402 -Q424 0.111121450015151 T377 -V413 0.110243057839838 I394 -K426 0.109064259981442 Y382 -A389 0.109013206751262 Y400 -A408 0.10892915175212 D395 -R422 0.106975145079187 F386 -R422 0.0972961269561243 K405 -Q424 0.0964545358846349 Y382 -M391 0.0958474377494785 E404 -E428 0.0952759878268171 K405 -D425 0.0948514544094314 I381 -I420 0.0923509529420592 I381 -L411 0.092202260060577 I394 -G427 0.0915622616277034 A379 -V413 0.090255788146326 K416 -V421 0.0894307062144724 E387 -D395 0.0865763217155149 E387 -L393 0.0860955220329493 A408 -V423 0.0857403803989403 T414 -R422 0.0847242778196032 T377 -L411 0.0817067322623846 A389 -V398 0.0731823933229858 M391 -Y400 0.072032427930372 I392 -Q424 0.0717028470267707 T377 -E387 0.0716280684873203 N396 -D425 0.0693484340606032 I378 -V421 0.0690434581477257 L390 -S412 0.0684138380120922 R380 -T414 0.0674636317056262 A379 -E418 0.0640400706900164 N384 -I392 0.0620749047618974 T377 -Y382 0.0616293090015891 L390 -A408 0.0615424663721367 H385 -I394 0.0594412389443746 R380 -K416 0.0591740884081053 F386 -S412 0.0580017652447937 I378 -F386 0.0549557161872015 R402 -E428 0.0543628439940242 T377 -I409 0.0525681258486994 I394 -R402 0.0521781253826965 K403 -G427 0.0516134792104694 A389 -A397 0.0512132694486427 I409 -K426 0.0509444504465382 S401 -A408 0.0493931394684406 L390 -L411 0.0490137109884405 K403 -E428 0.0486492969313335 L393 -S401 0.0476626677425314 L393 -G427 0.0469006537834218 I409 -D425 0.0468029450955991 N396 -A408 0.044349193030023 A379 -A389 0.0441006244677853 Q388 -L411 0.0439757687539037 I394 -N410 0.0416233836061679 A408 -G427 0.0402521388584915 K399 -K406 0.0402122709330781 A379 -E387 0.0399514645315193 S401 -I409 0.0391355265652931 I381 -L390 0.0383013574643765 K406 -E428 0.0374586430627355 N410 -D425 0.0371479661166683 I409 -A419 0.0371124778477796 F386 -V423 0.0358815481351962 L393 -I420 0.0342845538990169 I392 -A408 0.0342455307148128 M391 -I407 0.0333031590854764 L390 -I407 0.0320632113067862 D395 -I407 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