[Mon Aug 29 16:50:53 2016] >Input file: TMQ1LAN9M1G.pdb >TM segments: 840-869_ 918-936 MAIDEN score = 16.3410 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I848 -D855 10 K921 -A932 1.56740139351286 I848 -V854 1.52856970008472 L850 -K921 1.19039622060469 L918 -I930 1.15319291152749 I849 -Q923 1.03339557002336 A924 -K934 0.912595313135095 L845 -D855 0.894086049517785 L918 -I931 0.859206995565429 I849 -D855 0.739350138538296 L842 -A924 0.666756200511377 E844 -D855 0.61515050037274 R920 -L929 0.602206873724469 E844 -A856 0.591553761662201 I849 -V854 0.55396286217458 A846 -V925 0.47825654029236 K921 -K934 0.407802861780936 G922 -I930 0.40706414653584 A846 -Q923 0.403333474213498 A843 -A851 0.369003725003216 A843 -A927 0.364250601187817 I849 -G922 0.362879371269835 K921 -G933 0.345555821890128 I848 -A856 0.340134033973774 A851 -A924 0.331191436397881 K921 -A927 0.330559931816685 A924 -G933 0.326005144029293 E844 -G853 0.318061596019242 N919 -A932 0.307944901527351 A843 -S859 0.298798512017123 L842 -G936 0.287724435959739 L850 -A924 0.287659518389878 L845 -A924 0.286977102198372 G922 -I931 0.286286335866748 R920 -I931 0.259908171588598 G847 -A924 0.257226948889489 L842 -P858 0.24953090662174 L845 -G922 0.245164136368882 R920 -I930 0.242982594113705 G847 -S859 0.23219916388724 V925 -I930 0.228775076266497 R920 -K934 0.227387027375356 A846 -A924 0.221321725267105 R862 -A927 0.210979318883974 A851 -G926 0.207622840892476 G922 -T935 0.207028353620315 A856 -R862 0.205566817881595 A843 -G922 0.204169783129498 N852 -R920 0.201286080849105 A843 -D855 0.199712021377177 L850 -P858 0.198918503978216 Q923 -G933 0.185696840670097 L845 -K934 0.18045069176181 A843 -Q923 0.176740728795021 N919 -P928 0.176042652684098 D855 -R862 0.175902806787934 I849 -A932 0.17174715594758 Q923 -K934 0.170008570956469 I848 -G853 0.16788689046955 R920 -P928 0.166948655482095 A846 -G922 0.160012555471581 G847 -K921 0.156902683084799 G853 -Q923 0.155284695534695 K921 -I930 0.154228963224261 G853 -G922 0.152461466520436 A846 -I931 0.149873996623996 Q923 -G936 0.14942908283772 G847 -A927 0.149389040972567 A841 -G936 0.147597368457626 A841 -I848 0.147282198379393 N852 -A924 0.132722927376339 K921 -L929 0.126588532985764 K921 -P928 0.12573003475821 G847 -Q923 0.125061850834823 A843 -A856 0.123687765961549 G926 -G933 0.12209742044444 A843 -G926 0.121995402027186 L850 -K934 0.117784357759925 A843 -L929 0.114196338344227 V854 -G922 0.114181417541388 L918 -P928 0.11311756723708 A860 -A865 0.112597355059641 L845 -G926 0.112570063873678 V925 -G933 0.11204595291214 A856 -V861 0.111710416069844 G926 -A932 0.108810971489303 A927 -G933 0.108779218661164 G926 -I931 0.107928580504138 I849 -K934 0.107852160342842 A860 -G926 0.106478330639251 A846 -G936 0.106167631795508 A843 -A860 0.10319895617366 P858 -G926 0.101718478315795 A846 -A927 0.100505781423351 A851 -V925 0.0998454328340261 S859 -A865 0.0983949804940405 G847 -A856 0.0978375563503766 V861 -G926 0.0974905525608549 N852 -Q923 0.0963882191455064 E844 -G922 0.0946744804262418 I849 -L929 0.0938017842234385 A841 -G926 0.0933609426304569 A841 -A856 0.0932368378288091 L842 -A927 0.0917742974412015 E844 -L850 0.0884590155404097 K921 -G926 0.0883547791881059 L842 -G933 0.0882954486531222 L918 -Q923 0.087666798758868 I848 -G933 0.0872392974819063 E844 -R862 0.0870380336120347 G847 -G933 0.0824603310776386 L845 -Q923 0.0800400754363633 V925 -G936 0.0794825010933318 Q857 -G926 0.0790794828492771 L850 -A927 0.0776914926115397 L850 -L929 0.0762944305267617 A851 -P928 0.0750625473576765 G922 -L929 0.0748844062411895 A840 -I849 0.0747812992689947 N852 -A932 0.0742598593768946 A840 -L850 0.0731923233643483 I849 -A927 0.0723350054865373 K921 -T935 0.071971423836926 A840 -A856 0.071925633405495 A927 -A932 0.0718775790912267 A843 -K934 0.0687875990525884 I849 -Q857 0.0684870298086366 A851 -A932 0.0665208718869068 A851 -L929 0.066135553372186 I848 -S859 0.065850498893778 A851 -A927 0.0642763564680568 G853 -K921 0.0635122402269244 L842 -G926 0.0628979441736206 E844 -A924 0.0626060445283721 L845 -G933 0.0592329910047358 P928 -G933 0.0580825438950932 A843 -P928 0.0559853108061033 V861 -A927 0.0559260441582978 G853 -P858 0.0556727901784857 A846 -S859 0.0543470735911598 F866 -A927 0.051695538573032 I848 -G926 0.0509147288209728 G847 -V861 0.0508197632131273 A841 -V925 0.0484677455136144 A846 -R920 0.0473056678021502 A840 -S859 0.0468839739457305 V854 -Q923 0.046779720102478 A846 -I930 0.045983864969406 A863 -S868 0.0431357269563639 A841 -I849 0.0431208829054253 A843 -V925 0.0402734138301764 A840 -I848 0.0388256975574688 S859 -G926 0.036436520270702 L842 -D855 0.0362149429902752 G847 -R920 0.0359766930279966 L842 -K934 0.0337627081563028 A843 -G936 0.0333229596882987 L842 -A856 0.0332476874120758 A840 -Q857 0.0322686983337324 A843 -G933 0.0320679341539432 G847 -R862 0.0310089916593093 N919 -G933 0.0304784858814697 A856 -G926 0.0296883740470046 E844 -P858 0.0289649306556972 G847 -D855 0.0288346380046987 A841 -S859 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