[Mon Aug 29 17:07:22 2016] >Input file: TMQ1N8H9M3G.pdb >TM segments: 444-464 MAIDEN score = 8.4236 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A454 -H460 10 E449 -A454 0.600350775348899 M450 -E455 0.51319713111022 A454 -F462 0.489530938057341 A454 -T459 0.388920688689078 A453 -M463 0.388299354675659 E449 -T459 0.386937418829958 A453 -T459 0.377104559489499 D448 -H460 0.35254482026354 A454 -M463 0.346789339603256 E449 -R461 0.288258091581544 I451 -H460 0.280917315765333 M450 -I456 0.269850065028088 D448 -R461 0.262394021155381 D448 -A453 0.259350051514613 Q447 -T459 0.245771876375414 D448 -M463 0.222348786851251 E449 -G458 0.21556446074036 I451 -R461 0.204756595898873 R452 -H460 0.193732805903306 D446 -I451 0.189941131118275 I451 -T459 0.188677362258842 R452 -F462 0.181661905078575 E455 -R461 0.180125712212924 Q447 -R452 0.179918554460259 M450 -T459 0.176115980061437 Q447 -G458 0.163476222537847 E455 -G464 0.162888661449929 R452 -G464 0.121905595679031 V444 -A454 0.117069316397808 D446 -R461 0.115757766699916 E455 -M463 0.113137047932724 T459 -G464 0.106559893517737 D446 -S457 0.101128661307415 V445 -A454 0.0806588547843115 E449 -E455 0.069363396919377 D448 -T459 0.0624087893467182 D446 -I456 0.0608812911397449 M450 -M463 0.0566826076912827 D448 -S457 0.0461444322014829 I451 -I456 0.0353651595140745 V444 -E449 0.0210018439717627 Q447 -I456 0.0188463785596178 V445 -E455 0.0186497057076297 V444 -E455 0.0179538343964195 S457 -G464 0.0153095780848291 M450 -G464 0.0119845840589936 V445 -A453 0.0114323904461542 E449 -H460 0.00329771683843982 V445 -I456 -0.0076699660830446 A453 -F462 -0.00879576434726426 D446 -E455 -0.009961832446161 R452 -S457 -0.0165695348082169 R452 -M463 -0.0191307368247324 D448 -G458 -0.0217247895531432 R452 -G458 -0.0259072310522139 E449 -G464 -0.029038296605981 E449 -S457 -0.034919900665261 I456 -M463 -0.0352071731147641 D446 -A453 -0.0383919162331958 D446 -G458 -0.038575068440049 V444 -F462 -0.0430361669736286 V444 -M450 -0.0452973765520595 S457 -F462 -0.0461741634089825 I456 -R461 -0.0504737130566228 Q447 -R461 -0.0515057758918864 G458 -M463 -0.053413164385109 I456 -F462 -0.0562575834736343 D448 -F462 -0.0589257054558968 M450 -S457 -0.0618692782657027 I451 -G458 -0.0620105474451407 V444 -A453 -0.0670231205385239 E449 -M463 -0.0722455271850915 M450 -R461 -0.0808566772783821 E455 -H460 -0.0899286754637248 D448 -A454 -0.0919330976240254 D448 -E455 -0.0926153062408051 D448 -I456 -0.101905381151449 D446 -T459 -0.102131159160792 Q447 -S457 -0.105901480021743 Q447 -F462 -0.10605590826516 Q447 -H460 -0.106287113956238 M450 -G458 -0.118563279145546 I456 -G464 -0.122254007508828 M450 -H460 -0.12298993753291 V444 -H460 -0.135529960299136 Q447 -A454 -0.138430569499173 R452 -T459 -0.146033267279564 A453 -H460 -0.146062727116313 Q447 -E455 -0.152154784493599 D446 -A454 -0.154267266132866 V445 -R452 -0.159065012729146 G458 -G464 -0.16077324886153 S457 -M463 -0.162354402697579 E449 -I456 -0.165794499288918 V444 -R461 -0.167768818592244 V444 -R452 -0.171654587990048 V445 -M450 -0.173310385392591 V444 -I451 -0.175492953865379 Q447 -A453 -0.193820508983742 E455 -F462 -0.20658426868437 V445 -H460 -0.218298927562623 D446 -R452 -0.218765315897144 A453 -G458 -0.230598173560296 A454 -R461 -0.257793280391451 D446 -H460 -0.292492804418395 I451 -G464 -0.298254753979392 I451 -F462 -0.313828507102958 M450 -F462 -0.352981000281369 I451 -S457 -0.353168006644887 R452 -R461 -0.365062914581785 A453 -G464 -0.366901758726252 I451 -M463 -0.366970933952166 E449 -F462 -0.458079466300322 V445 -I451 -0.464012541984731 A454 -G464 -0.487322887993418 A453 -R461 -0.642237759703074