[Mon Aug 29 17:12:43 2016] >Input file: TMQ20144S5G.pdb >TM segments: C549-560 MAIDEN score = 0.0964 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E551C-K558C 0.388131848890044 A553C-K558C 0.247013951447748 M552C-N559C 0.230455277850459 E551C-N559C 0.124933620201436 A553C-N559C 0.0986522244383261 E551C-A556C 0.0764474071510226 A553C-A560C 0.0704670948287101 R549C-W557C 0.0675631839256381 D550C-K558C 0.0611082684340616 M552C-K558C 0.0532741452272187 D550C-W557C 0.00736753882714813 E551C-W557C 0.00729436200168943 M552C-A560C -0.00763966910788216 R549C-M554C -0.0329014686547406 R549C-K558C -0.0404610654793585 D550C-S555C -0.0676636250140847 R549C-S555C -0.0864298330307964 M552C-W557C -0.130954225173995 D550C-A556C -0.143781706443487 M554C-N559C -0.165242088098291 S555C-A560C -0.195403701014074 M554C-A560C -0.231869020560912 R549C-A556C -0.233961476384675