[Mon Aug 29 17:29:46 2016] >Input file: TMQ235Z7M3G.pdb >TM segments: 846-854_ 858-864_ 869-878_ 972-983_ 986-996_ 1063-1080 MAIDEN score = 37.2029 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q853 -N858 10 S976 -Y992 10 T859 -C877 10 P979 -P986 2.41304353923357 V850 -Q860 2.23045235861627 C975 -E993 1.11603102564183 C975 -Y992 1.07295261847648 C975 -T980 0.949806621109241 S862 -I873 0.728259178560828 V850 -N858 0.71595726730935 P979 -K1080 0.68550906902347 F851 -Q860 0.621052746468717 E848 -D861 0.601087527148158 E848 -S862 0.576278289546802 C975 -L991 0.572344904386814 N858 -C877 0.569309895930031 C1063 -C1071 0.545309732752424 C975 -C982 0.540566734868541 C1063 -C1068 0.509428672194581 P979 -Q1073 0.505727370366669 E977 -D988 0.4724178671264 E977 -C1071 0.471656407265755 C972 -E977 0.471421957960729 E974 -C982 0.452822009686368 D861 -C877 0.445278946202879 C975 -E1070 0.436770880057375 E974 -P979 0.420405504711153 T859 -G875 0.419667524859407 S976 -L991 0.392798122040418 Q981 -K989 0.377045839559145 Q860 -C877 0.37627549214787 S862 -S871 0.375814576243557 L849 -S863 0.375688765928297 L849 -Q860 0.367972789813217 Y847 -S871 0.364567136776938 E974 -C996 0.358512165212794 C982 -C1078 0.337920285643008 E977 -T983 0.337512148400017 E848 -Q878 0.334494358773702 S862 -G875 0.33208742380567 E974 -Q981 0.319479806330705 F872 -C877 0.311773213499471 E977 -Q1073 0.310379194298187 C854 -C877 0.307461382443338 K973 -Q981 0.306181241107262 Q981 -K1080 0.305936514427428 E977 -Y992 0.303558194183755 Y847 -K864 0.303527362709531 Y847 -Q870 0.303444435677628 G852 -S876 0.295411867372795 E987 -T1079 0.29504930128856 N1066 -C1071 0.280386173318721 S862 -Q870 0.275401561890763 C975 -T983 0.272311607827975 G846 -S871 0.270959786545831 P986 -K1080 0.269334478335656 E848 -G869 0.262997131000824 C972 -E993 0.259527357406549 F851 -N858 0.257486023127922 P986 -Y1074 0.253313286948748 E987 -K1080 0.252563576401204 G852 -Q860 0.250575784842988 Q853 -S876 0.249542033006999 Q853 -T859 0.249149473739648 S978 -Y1074 0.244730086360395 D861 -D874 0.237414739971561 Y847 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