[Mon Aug 29 17:37:39 2016] >Input file: TMQ27ID8M2G.pdb >TM segments: 488-523 MAIDEN score = -7.5340 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T489 -E495 0.446332211171551 V512 -R517 0.433152728583543 K496 -S504 0.323025166228189 R516 -L521 0.314178429591221 E495 -L501 0.30289133313118 A500 -S507 0.298547716875615 D490 -V498 0.297769462562229 K496 -E502 0.293885168598584 E510 -R516 0.277747887916058 R517 -L522 0.276518797084101 V511 -R516 0.252468810795798 T506 -Q514 0.247322134610338 D490 -K496 0.215229216859764 S504 -V511 0.207230996676719 V511 -G518 0.193929474774288 E495 -K503 0.174589651752532 S507 -Q514 0.16419355829037 K496 -L501 0.158385811931523 E502 -E510 0.141696816903593 S499 -S509 0.140708081482069 K503 -L508 0.13718524367362 E495 -A500 0.130177005721104 H488 -E495 0.122573112060595 L501 -S509 0.109841397564308 E510 -G518 0.108789762435948 S507 -V512 0.107317634382749 S509 -R517 0.10427622491354 A493 -L501 0.0973075324309386 Q514 -L519 0.089784242235579 E502 -L508 0.0875109030613375 V511 -L519 0.0851178101367425 L513 -F523 0.0846338294908549 A493 -S499 0.0825578016378534 T489 -S497 0.0819927386477742 Q514 -L522 0.0813018395866578 E495 -S504 0.0807437776045647 S497 -E502 0.0761018411181458 L491 -V498 0.0737749659356215 D490 -S499 0.0647007936179884 L505 -Q514 0.0590545693147417 V498 -L505 0.0510654412606222 V498 -T506 0.0453891444273937 A493 -A500 0.045110884118216 T489 -K496 0.0430366333016514 L505 -E510 0.0412343711945011 S509 -G518 0.0398501427120301 S497 -L505 0.0381289859219809 L513 -L521 0.0368887498070167 T506 -V511 0.0357094387436758 S504 -V512 0.0349791259894993 S504 -S509 0.0289181096807472 T506 -N515 0.0263932209509345 D490 -S497 0.0236766285725447 E510 -R517 0.0231089520023899 N515 -D520 0.0228482702858783 S499 -S507 0.011916611134174 S499 -T506 0.0108915828101059 K496 -K503 0.00960831139130747 G492 -S499 0.00892063972753609 E502 -S509 0.00316275610025629 L491 -L501 0.00275499870470775 S504 -E510 -0.00172366308701699 E510 -N515 -0.00403735127170268 A500 -L508 -0.00470150691516302 L494 -L501 -0.00543051632731606 S507 -N515 -0.0102115788549932 T489 -V498 -0.0125562369312182 K503 -V511 -0.0152489617385072 L491 -S499 -0.0163095019530797 S499 -L505 -0.021006615943616 L505 -L513 -0.0256947523027705 S497 -T506 -0.0265216109685311 Q514 -D520 -0.0370768508432215 L508 -N515 -0.0399889821376429 L513 -L522 -0.042661346221049 T506 -R516 -0.0455890690043154 V498 -S509 -0.0462735705127946 K503 -L513 -0.0471870911504007 N515 -L522 -0.0490221327432223 A493 -E502 -0.0507580397999323 S509 -L519 -0.054318486662515 K503 -S509 -0.0571601363253486 L491 -K496 -0.059278093054365 S504 -L513 -0.0596114729786512 S497 -K503 -0.0616705687017553 R517 -F523 -0.0708631400201645 L494 -E502 -0.0733860607031414 S507 -R516 -0.0748728763924638 L505 -R516 -0.0754489928854627 Q514 -F523 -0.080199929038975 S509 -R516 -0.0911835304847191 V498 -K503 -0.0918817548934365 V512 -D520 -0.0927380593239429 D490 -E495 -0.0933609655091719 V498 -S507 -0.0961066659766301 E502 -V511 -0.0967156154092441 L508 -R516 -0.0977875433082698 E495 -L505 -0.102313021752879 G492 -S497 -0.103291320797183 L501 -E510 -0.103440495218042 V512 -L521 -0.105058306599121 V498 -L508 -0.107956753849113 G492 -L501 -0.108576841616912 E502 -V512 -0.110125868515001 A500 -S509 -0.110156939772957 A500 -T506 -0.116932813088863 D490 -L501 -0.117003643064976 G492 -V498 -0.117839512872291 E495 -E502 -0.122330555842433 L508 -R517 -0.124017385696239 V498 -S504 -0.124199088305929 S497 -S504 -0.128755578349437 L494 -L505 -0.13789826259101 E502 -S507 -0.142052116893509 S509 -Q514 -0.143319044054875 H488 -V498 -0.144232895514083 A493 -V498 -0.146375435210235 N515 -F523 -0.146529454730619 T506 -V512 -0.150534587901569 L505 -N515 -0.151028272606746 V511 -R517 -0.16058846968268 A500 -L505 -0.160614816198246 L508 -Q514 -0.161609100908064 E510 -L519 -0.164765152614126 Q514 -L521 -0.165274811718101 L491 -A500 -0.16580371777289 L491 -E502 -0.166063687997719 K503 -E510 -0.18516023312552 L494 -S504 -0.185248152695792 K496 -L505 -0.188513921790439 S499 -L508 -0.189020205944242 H488 -L494 -0.197342534912128 V512 -G518 -0.200990446221392 K503 -V512 -0.204577056594606 L491 -S497 -0.207204813839927 L494 -K503 -0.208746352721836 R516 -F523 -0.233328591705215 R516 -L522 -0.249666167657804 N515 -L521 -0.251719402517635 T506 -L513 -0.257108722397025 V512 -L519 -0.257782253296242 L513 -G518 -0.264376579264129 G518 -F523 -0.266716836173204 V511 -D520 -0.267006717551805 L505 -V511 -0.278512134397676 L494 -A500 -0.293649271210744 S507 -L513 -0.297524084113361 S509 -N515 -0.301086718492849 L513 -D520 -0.303763380064411 L501 -T506 -0.316296607278227 T489 -L494 -0.333787031926999 L501 -S507 -0.342141729714959 L494 -S499 -0.356251004026921 L505 -V512 -0.409397489875155 H488 -A493 -0.417105607262832 L508 -L513 -0.420919957353064 L501 -L508 -0.425164601254536 L513 -L519 -0.460639626712211 S499 -S504 -0.534126297833303