[Mon Aug 29 17:45:12 2016] >Input file: TMQ2CAB6M1G.pdb >TM segments: 466-501 MAIDEN score = -7.6348 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A483 -T488 0.372998659426775 G473 -A499 0.319614276691711 A483 -L491 0.296413809604063 Q476 -E495 0.263403235305154 S471 -S498 0.207996214979603 Q476 -A496 0.188317642580925 L470 -V478 0.187749717962173 Q474 -T497 0.179104003040842 R477 -D494 0.177283563810741 R475 -D494 0.17709601848547 Q474 -A496 0.145754734000905 N469 -Q474 0.143553376240459 R477 -R486 0.143045459374504 A479 -R486 0.142155795956423 R475 -A483 0.141667183885063 L470 -I480 0.137073440051001 L470 -Q476 0.134384119531961 S468 -V478 0.129321180646544 G472 -D501 0.118745028849989 L470 -A479 0.118047440350989 A479 -S498 0.117550104934985 G467 -R475 0.117067488365171 Q474 -A479 0.116609679856219 G473 -S498 0.115029057715373 S468 -Q476 0.115009084130437 G472 -S498 0.112220032916509 V478 -A496 0.109062344916906 L485 -L491 0.108957023980734 R466 -Q474 0.108027074192527 Q476 -A481 0.104002833922963 R475 -R482 0.101450270944532 S471 -A481 0.0982125306645389 N469 -R477 0.0977638151697633 R475 -T497 0.097315782955016 R475 -A499 0.0960068148546007 S468 -A479 0.0938049897362658 L484 -A496 0.0923327650722747 R477 -E495 0.0897682817869034 I480 -D487 0.087528305198983 E495 -L500 0.0856947791733303 S471 -T497 0.0853740451339758 R477 -T497 0.0841762879973794 S471 -L500 0.0834242176371935 L493 -S498 0.0807533133015008 S471 -A499 0.0806164992470264 R486 -L492 0.0805777982369129 G467 -G472 0.0802264637006429 L470 -L500 0.0789502832308608 R482 -L493 0.0786036560911521 R482 -L491 0.0718562302696178 Q476 -L491 0.0645537123760902 A481 -P489 0.0637984082630281 G472 -E495 0.0623274089704156 R477 -R482 0.0612089567687049 R477 -L493 0.060541279236054 Q476 -A499 0.0583120817777705 A481 -L492 0.0568651955363977 V478 -R486 0.0527036377681143 A483 -A496 0.0520508666117889 A481 -A496 0.0492025840511765 S471 -D501 0.0481647740400598 D494 -A499 0.0478709120128951 S468 -G473 0.0426309831136215 Q476 -D494 0.0380712074988709 R482 -L492 0.0348585820140981 A481 -L493 0.0328768640535981 A479 -L491 0.0294128718820206 G472 -A481 0.028789122045231 Q474 -S498 0.0274320709432063 S471 -A479 0.0255785297040516 A481 -L491 0.0254701158434747 A483 -D494 0.0245357089155467 T488 -L493 0.0235714362244455 I480 -V490 0.0162846488682646 S468 -R475 0.0157072687487401 L491 -A496 0.0143464273236056 Q476 -L485 0.0134304855652099 G472 -A496 0.00976281744361529 R475 -I480 0.00877669895909472 D487 -L492 0.0076946994561149 R477 -A496 0.0069671438672767 L493 -L500 0.00462467889887463 N469 -Q476 0.00358422118891136 L491 -T497 -1.59209008778749e-05 G472 -I480 -0.00129844312362404 L492 -S498 -0.00169451517406927 G473 -D501 -0.00367299011030764 G473 -E495 -0.00450826703933016 Q474 -I480 -0.00475354263987615 Q476 -L500 -0.00742708766315858 Q476 -A483 -0.00782090618869624 I480 -E495 -0.0113946965136842 A479 -L492 -0.0131311031165593 A479 -T488 -0.013680945048252 R482 -P489 -0.016118029355126 Q476 -L493 -0.0164888477796565 Q474 -L500 -0.0194077356651334 R482 -T488 -0.02309844195221 A479 -D487 -0.0254734886482728 V478 -L491 -0.0262133606345252 I480 -L491 -0.0268656319316762 G473 -A481 -0.0279140143549388 G473 -A496 -0.0287813597717959 G472 -R477 -0.030481557281528 A481 -V490 -0.0320898282238531 E495 -D501 -0.0340749462252843 Q476 -L492 -0.0341732655321465 R482 -V490 -0.0354057355607011 A479 -T497 -0.038871852706813 A483 -L492 -0.0411338365565843 Q476 -T497 -0.0414977288980358 I480 -T497 -0.0460472387085225 A479 -V490 -0.0479484405352739 R466 -S471 -0.0484996687806355 R475 -L500 -0.0489370524572683 L470 -R482 -0.0498016216025255 G472 -A479 -0.0498903549449459 R466 -R475 -0.0511404662042034 N469 -A479 -0.0530672539852151 R477 -L485 -0.0536166089099206 A496 -D501 -0.0545516767121694 Q474 -R482 -0.0550453781226783 A479 -D494 -0.0588644144129469 Q476 -L484 -0.0590400635907855 A481 -T488 -0.0591200275413772 G467 -Q474 -0.0618088837655844 L484 -L492 -0.0620335817767188 S471 -A496 -0.0626096146061386 R477 -L492 -0.0649459270316828 L470 -A481 -0.0655578304292908 A481 -R486 -0.0672729838665074 R475 -S498 -0.0683274978483815 A479 -E495 -0.0687322309632328 Q474 -A483 -0.0726386973128803 N469 -V478 -0.0735799535989907 L492 -T497 -0.0741297326320134 V478 -L493 -0.0769361835105231 S468 -Q474 -0.0787840844819565 G472 -T497 -0.0820355595851412 D494 -L500 -0.0829167204059451 S471 -Q476 -0.0836171169372578 S471 -I480 -0.0838699591436243 R475 -E495 -0.0881535515112604 Q474 -A499 -0.0898232161075385 Q476 -D501 -0.0903354330599125 S471 -R477 -0.0906797739607653 V478 -T497 -0.100611757599616 Q474 -A481 -0.100626898074693 R482 -A496 -0.100754460603288 S468 -R477 -0.101674134029147 A481 -D487 -0.103826454759377 R477 -S498 -0.107933864852196 I480 -D494 -0.116309272228953 L493 -A499 -0.125600567145228 R475 -L484 -0.130675834751215 Q476 -R482 -0.132457550960597 I480 -P489 -0.134942168323676 G472 -V478 -0.136764488866521 G473 -V478 -0.139506982844281 L485 -L492 -0.140564498341297 L484 -L491 -0.142500337251892 R477 -L500 -0.143106873869316 R477 -L491 -0.144635848683047 G473 -T497 -0.145586803294871 R475 -L493 -0.15660696800111 G473 -L500 -0.157375382723479 A483 -L493 -0.160751976092802 R482 -D487 -0.160780011005826 L485 -V490 -0.161742043128753 R475 -A496 -0.164757158673716 G473 -R482 -0.164767465354634 A483 -P489 -0.17126153217723 L484 -V490 -0.172061726429831 Q476 -S498 -0.173057086316163 I480 -T488 -0.174770551178396 I480 -L493 -0.177053797884875 L484 -L493 -0.187798197028324 R475 -A481 -0.202269002806092 R477 -A483 -0.209977608137765 G472 -A499 -0.217295341858506 R486 -L491 -0.224276497473882 L470 -R477 -0.2280643964598 A479 -A496 -0.241757595459532 R466 -V478 -0.244020362336897 V478 -D487 -0.25040117265343 S471 -V478 -0.256227743754177 R477 -L484 -0.264240069808873 V478 -L484 -0.271103398925042 G473 -A479 -0.272540538681806 A479 -L485 -0.275772176640396 I480 -L492 -0.277618192456887 A479 -L493 -0.277834661663766 V478 -L485 -0.285490701944074 G473 -I480 -0.296079240399666 A479 -L484 -0.302903698657085 I480 -A496 -0.308286634884792 I480 -L485 -0.320183252010336 V478 -A483 -0.324123238591538 N469 -R475 -0.33378894288869 A483 -V490 -0.363433678494992 I480 -R486 -0.381535147058602 G472 -L500 -0.40587069194599 L484 -P489 -0.481985002428964 L470 -R475 -0.498714761276342