[Mon Aug 29 17:45:31 2016] >Input file: TMQ2CAB6M3G.pdb >TM segments: 418-443 MAIDEN score = -6.7979 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- R425 -H438 1.23959477230374 R432 -H438 1.10420594241842 D433 -H441 0.533955458101551 R425 -L439 0.366259495586443 R425 -D440 0.351200734855641 R425 -V442 0.334608594010882 L429 -V434 0.317766223393224 L429 -G435 0.269888980284976 I428 -H438 0.236053361677339 R425 -D433 0.220252052395828 T423 -H438 0.200054819590528 E426 -A437 0.19550120445932 D421 -N427 0.189864361852181 I428 -H441 0.181056567981278 A418 -R425 0.179980999671743 R425 -G435 0.165552058204825 A418 -E426 0.155514023263918 N427 -D440 0.150680478658841 F420 -R425 0.134055912342488 V434 -H441 0.132918007114517 L419 -L430 0.11814672959045 T423 -G435 0.115947821877961 I428 -D433 0.100863853101623 I428 -L443 0.096739825617032 G431 -A437 0.0939641701838658 L430 -L439 0.0926333775177997 I428 -A437 0.0890609260262565 R432 -L439 0.0695717254407657 L424 -A437 0.0663819925458323 L424 -R432 0.0652130385688214 L430 -A436 0.0599356738780392 R432 -V442 0.0584839808362414 E426 -H441 0.0512045833610149 L424 -G431 0.0479474010976633 G431 -V442 0.0468152402666171 F420 -E426 0.0444569098820153 L419 -N427 0.0438057041510804 L424 -A436 0.0423534259226921 N427 -G435 0.0417874634673132 G435 -L443 0.040825233585668 L429 -V442 0.0373016731216653 A418 -N427 0.0371997392596404 N427 -D433 0.0279079445613325 I428 -A436 0.0270855309923848 T423 -V442 0.025359967041914 G431 -H441 0.0238174534070679 T423 -L430 0.0191319565232382 E426 -V442 0.0174131669251912 L424 -H441 0.00956890086211003 R425 -G431 0.00949603715884674 E422 -L430 0.00835348111687573 N427 -A436 0.00833223204267508 A418 -G431 0.00708107253473633 T423 -A436 0.00687194546836611 G431 -D440 0.00366858549786048 N427 -A437 -0.00258800609424309 L419 -R425 -0.00309399279025158 L429 -H441 -0.00696616548979589 R432 -A437 -0.00881295076183974 L419 -L429 -0.0152682497634995 G435 -D440 -0.0173057872202436 E426 -D433 -0.018309191692 E426 -R432 -0.018387038699718 F420 -L429 -0.0199771823187938 L424 -L430 -0.020771733111236 N427 -V442 -0.0243417956755247 L424 -V442 -0.026727995653097 G431 -A436 -0.0269866328652699 R432 -D440 -0.0288881725785588 L430 -A437 -0.0311736944690022 G431 -L439 -0.0332081771248873 R425 -R432 -0.0361257777432664 N427 -H438 -0.0369249808136387 N427 -L439 -0.0382252739231591 L429 -A436 -0.0413607524587123 T423 -L439 -0.0428260492849892 F420 -I428 -0.0470425951874338 L419 -E426 -0.0587762590547687 E422 -G435 -0.0613016248318217 L424 -D440 -0.062468684572913 R425 -L443 -0.0637781828647768 F420 -N427 -0.0673115481207414 L429 -L439 -0.0736621687654155 I428 -D440 -0.0762694405052882 L424 -V434 -0.0805859699377338 N427 -V434 -0.0827421472394081 A418 -T423 -0.0828023940496029 L424 -G435 -0.0845869183400438 L429 -D440 -0.0871495571110094 L430 -H441 -0.0931466334277298 D421 -E426 -0.0936086720239385 N427 -R432 -0.0951389847728303 E426 -G435 -0.0964262341363336 V434 -V442 -0.0965052204588648 E426 -A436 -0.0995593449573851 L430 -G435 -0.100176476311531 L424 -L443 -0.100253472677826 D421 -I428 -0.102142046807915 V434 -L443 -0.103253414797277 L430 -V442 -0.103627004761072 E422 -L429 -0.105662761965266 D433 -L443 -0.109179558590309 N427 -H441 -0.109471824404481 G435 -V442 -0.111870469384609 D433 -V442 -0.11372638417282 E426 -H438 -0.114582755949801 T423 -I428 -0.116148330221464 L419 -I428 -0.122384430084966 E426 -L439 -0.122644796668568 D421 -L429 -0.127770363286608 L429 -A437 -0.132616474523915 A418 -I428 -0.144076516560551 E426 -L443 -0.148634243690183 E426 -D440 -0.150639210348958 E422 -N427 -0.154255654419339 L424 -D433 -0.1545242202028 D433 -D440 -0.15664244232761 R425 -V434 -0.157305958413377 A418 -L430 -0.161033238547873 L424 -L429 -0.168661190289455 L419 -L424 -0.179188322741164 A418 -L424 -0.179307195925809 E422 -I428 -0.193643014361745 L424 -H438 -0.203834658931765 E426 -G431 -0.207044526432016 R425 -A436 -0.209003779285317 E426 -V434 -0.211710017125255 R432 -H441 -0.221263546961999 A437 -L443 -0.225425666566445 A436 -L443 -0.234909609403673 I428 -G435 -0.237879137544401 G435 -H441 -0.238452672874173 R425 -H441 -0.249057635255701 R425 -A437 -0.250966429141855 G431 -H438 -0.256154247457862 L430 -H438 -0.267516255017213 D433 -L439 -0.274792678848558 R425 -L430 -0.285807346343223 V434 -D440 -0.295519820023076 A418 -L429 -0.295889048698249 T423 -L429 -0.300940064441528 I428 -V442 -0.312603700618956 L429 -H438 -0.357769101135098 A436 -V442 -0.368511158301505 V434 -L439 -0.383137148142807 H438 -L443 -0.4086242598699 I428 -L439 -0.417333492508713 A437 -V442 -0.449716721270443 L424 -L439 -0.464506921736575 I428 -V434 -0.466974889798737 A436 -H441 -0.491432312786849 D433 -H438 -0.78024443776217