[Fri Aug 26 18:04:56 2016] >Input file: TMQ2TBU2M1D.pdb >TM segments: 153-174_ 176-200 MAIDEN score = 9.6024 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T157 -N190 10 F163 -K193 1.18153546542971 I159 -F191 1.15727995802305 F163 -C170 1.1430467396059 F162 -V196 0.969827511871528 W158 -F191 0.958633440062953 F163 -V194 0.910474376332362 F162 -V194 0.841772449912266 F163 -V196 0.675521575723762 V194 -Y199 0.654337053056042 V160 -F191 0.622055461964423 N165 -C170 0.612111900457059 E161 -C170 0.565943612284922 I159 -G192 0.492860245296047 E161 -G192 0.490042967677109 F163 -D169 0.478636810280762 E161 -F191 0.472039443072733 T157 -F191 0.447342054237748 Q171 -K193 0.433674051816911 R155 -L189 0.433474745899626 T157 -L189 0.427926736353898 V160 -N190 0.389868787943419 N165 -K193 0.384100694503214 A164 -A174 0.364337299233324 T157 -T187 0.36130570986508 T157 -C186 0.357906890229646 I159 -S181 0.354965536876795 V160 -Y184 0.347488200323161 S181 -F191 0.347148770578991 N165 -Q171 0.32561940509513 K154 -C186 0.284229444067211 L180 -G192 0.283680660567199 D153 -V160 0.281884202299485 E161 -V194 0.26674602459985 N185 -G192 0.264823962204499 L182 -G192 0.252684982594929 A174 -G192 0.24887968701726 A178 -K183 0.246469118422105 Y177 -L182 0.234486964672251 R155 -G188 0.233379985752545 D153 -G188 0.233317999671792 D179 -Y184 0.224822411833296 E161 -Q171 0.215513807908676 L180 -T187 0.211983627695304 D169 -A174 0.209496884547396 V160 -V194 0.209003744337815 W158 -K193 0.206474039884494 N165 -Y199 0.20375963524566 Y177 -V194 0.202465342714103 T157 -N185 0.198862039872354 D169 -D195 0.197945942793605 D179 -N185 0.196613105687288 L180 -C186 0.188574472770309 W158 -K183 0.188497980715566 R155 -N185 0.185525352653191 S167 -K193 0.183523246088097 E161 -Y199 0.183375959103891 D153 -L189 0.181470648077555 L180 -N185 0.180736702996134 C170 -Y177 0.179383648609689 W166 -R198 0.179108537986291 I159 -A178 0.178673658488073 E161 -Y177 0.177425093266966 R155 -T187 0.176567787698998 A164 -C170 0.175806106216585 S172 -A178 0.172997216662418 A164 -S172 0.169853723061731 F162 -N190 0.166729758015114 E161 -D195 0.165614383549899 D153 -T187 0.163510496821761 C170 -G192 0.162012330591432 A164 -F173 0.161441403689823 A164 -G197 0.158949392201015 K193 -T200 0.155680752413073 I159 -K193 0.150243341667801 E161 -A174 0.144628068241707 R155 -N190 0.141640585846048 W166 -S172 0.140678484640802 W166 -K193 0.138520963121747 F162 -C170 0.138247799191127 T187 -G192 0.137340252438154 V160 -Y199 0.135243043794414 F162 -S172 0.134828083168478 D169 -Y177 0.133583274391345 Y184 -G192 0.132018243735056 R155 -G192 0.128146956142567 N165 -T200 0.125138026983359 E161 -G197 0.122805608832531 F173 -K193 0.122132811031414 A174 -D179 0.121557398008972 V160 -D195 0.120355675711108 I176 -G192 0.120144751399577 F162 -S168 0.118856754197595 I159 -K183 0.118718575175111 V156 -S181 0.117250585363183 F162 -Q171 0.11660185582752 A174 -V194 0.114396821856276 S167 -A174 0.11174200423079 S167 -Y177 0.110044256575148 F162 -Y177 0.109091142115326 L180 -L189 0.108437458552562 A164 -V194 0.106050233634708 D179 -K193 0.101151433572327 Y177 -L189 0.0972292624772866 A164 -T200 0.0961472300524501 D169 -K193 0.0910013692204482 D179 -N190 0.0892955013888383 F163 -Y177 0.0890492608377684 C170 -G197 0.0889178839297626 V156 -Y184 0.0885026563593142 F162 -F173 0.0882425733980003 V160 -G192 0.0879380999516179 T157 -Y177 0.0874906279948519 A164 -G192 0.087359564746742 L189 -V194 0.085829573028422 L180 -G188 0.0811830129572635 V160 -L180 0.0790406095077252 A174 -F191 0.0740047961525292 D179 -F191 0.07397806354561 Q171 -V194 0.0708408083612411 L180 -K193 0.0696940381891911 Y177 -T187 0.0692088302767737 T157 -K193 0.0679303496788757 N165 -Y177 0.0669765906965896 I159 -L189 0.0662187328599754 Y177 -N190 0.0660985786265575 E161 -D169 0.0654344222277947 D153 -W158 0.0629821286676573 V160 -L182 0.0627466304438196 V156 -C186 0.0622795083358989 V156 -T187 0.0598618254106538 A178 -N190 0.0597505417545756 S167 -V194 0.0593732852356639 F163 -T200 0.0580468594077184 S168 -G197 0.0571644152212518 V160 -I176 0.0562818815575055 V156 -N190 0.0558428140927119 T157 -F162 0.0551144135054189 T157 -K183 0.0547969565618496 Q171 -A178 0.0525371512148703 F163 -I176 0.0525339910269951 G192 -Y199 0.0507748596201587 Q171 -D195 0.0506025204056273 N165 -S172 0.0473188927068708 V160 -D179 0.046471796320442 E161 -S168 0.0458719922743818 S172 -D179 0.0452458241062663 T157 -L180 0.0438844066950459 I159 -N185 0.0409130035236016 S172 -K193 0.0407494560378847 I159 -L180 0.0384072072240458 I159 -V194 0.0377830008937146 F163 -A178 0.0371576355077581 R155 -V160 0.0321455710791168 T157 -A178 0.0313720285936134 F162 -F191 0.0307781566991148 A178 -G188 0.0286876532296048 S168 -D195 0.0285085353535621 E161 -Y184 0.0267725388765676 N165 -G192 0.0262038380648533 D169 -V196 0.0255321749346784 F173 -F191 0.024793636146681 C170 -V194 0.023095350583819 S181 -K193 0.022484824640446 F173 -G192 0.0221548821102182 V160 -A178 0.0212489041129966 I159 -A174 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