[Mon Aug 29 17:56:40 2016] >Input file: TMQ2VYF4S1G.pdb >TM segments: A313-325 MAIDEN score = -2.8813 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- R313A-K319A 0.30710751064321 L316A-K324A 0.15777162623545 L316A-K321A 0.148979081384655 F314A-K319A 0.104956839256829 R313A-K321A 0.100608190429984 Q315A-L320A 0.0773615489193462 Q315A-I323A 0.0543502287678961 F314A-S322A 0.0144463685557843 L317A-A325A 0.00179628510658336 R313A-M318A -0.00454028767277448 K319A-A325A -0.0145813848816534 M318A-K324A -0.0608894688167667 M318A-A325A -0.0655186176632938 R313A-S322A -0.0871172939998301 Q315A-S322A -0.101255952263679 M318A-I323A -0.105831008084792 L316A-A325A -0.127558076654084 F314A-I323A -0.138662416820093 R313A-L320A -0.202510505012098 Q315A-K321A -0.209689361445211 L317A-S322A -0.231023383195188 F314A-K321A -0.232645373453004 L317A-K324A -0.239615648335862 Q315A-K324A -0.250740446831879 L317A-I323A -0.268978555923209 L316A-I323A -0.280990739286395 F314A-L320A -0.281941830300293 L320A-A325A -0.295841115041406 L316A-S322A -0.303188371507827 K319A-K324A -0.345556258700301