[Mon Aug 29 17:59:37 2016] >Input file: TMQ31263M2G.pdb >TM segments: 105-117 MAIDEN score = -3.4639 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Y112 -K117 0.578819286103465 W108 -G116 0.236582594814741 V106 -H114 0.195069293833183 C105 -H114 0.144884911106774 E107 -Y112 0.130194298753023 W108 -K117 0.09584355063885 E107 -L113 0.0584415225446397 E107 -L115 0.0139974848134772 E107 -H114 0.00944714659177182 E107 -K117 -0.0193180887057303 E107 -G116 -0.0321790617612723 V106 -L115 -0.0631674321380045 C105 -L113 -0.0762598260002711 H110 -K117 -0.0845044362173191 T111 -K117 -0.13394148399084 W108 -L115 -0.143924138293581 V106 -T111 -0.146432303369021 W108 -L113 -0.184597787372441 L109 -K117 -0.190440548511225 L109 -G116 -0.191666104615393 T111 -G116 -0.196014654467954 C105 -H110 -0.201259984250289 C105 -Y112 -0.234001019687595 H110 -G116 -0.257604964784251 V106 -L113 -0.282773497491771 L109 -L115 -0.371356536995517 V106 -Y112 -0.381675831111849 W108 -H114 -0.383465895198992 H110 -L115 -0.39993925011628 L109 -H114 -0.411726283759084 C105 -T111 -0.540892231472661