[Mon Aug 29 18:09:33 2016] >Input file: TMQ3KFQ3M1G.pdb >TM segments: 659-667_ 673-683_ 713-724_ 729-738_ 740-746 MAIDEN score = 10.5476 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- S719 -I732 3.11758104875457 I732 -M743 1.57683680513118 L666 -V678 1.28765277200034 L722 -I729 1.1657307447305 L731 -F745 1.07899003907269 H717 -I732 1.05840261761977 P735 -F741 1.02676701811566 A716 -P735 0.982513902781895 V678 -F745 0.903314159928031 I729 -T746 0.858287443394261 E667 -L675 0.822909960604556 H717 -P735 0.703266582964152 I732 -F745 0.671128379761504 M736 -F741 0.657323839909816 L731 -T746 0.637863405103895 G733 -F741 0.593162763515606 Y665 -G679 0.584835586812247 S719 -G733 0.531378731342899 F723 -I729 0.529063041948357 S677 -I729 0.508701815333733 G733 -S744 0.496090778430388 E667 -G679 0.475595290570553 V678 -T746 0.45544858879416 E667 -P724 0.455123629154458 E667 -D673 0.453919683031065 L731 -M743 0.45211412711782 E667 -P681 0.445620162366136 L666 -S677 0.440654046786266 I729 -F745 0.427667434536605 N662 -P681 0.371893767280345 S719 -P735 0.363947996850565 H717 -S744 0.344398340457397 Q713 -P737 0.332559488647638 H717 -G740 0.306572311210774 I732 -S744 0.297929204257777 E667 -V678 0.293110957918373 G714 -N734 0.286550237209083 L731 -S744 0.274998432046583 P724 -I729 0.273211422470148 E720 -E730 0.269135447722475 R721 -M743 0.268857686018963 Q713 -T718 0.24505230460789 V678 -I729 0.243808445446973 E720 -T746 0.237505921460444 L722 -E730 0.235493086432092 E720 -I732 0.225793555027782 R715 -M736 0.219496033088971 V659 -M736 0.211709202168445 G679 -S744 0.207467833897149 G714 -P737 0.202338380437722 I676 -T746 0.199940223179759 D673 -V678 0.1978100461855 A660 -R680 0.196125162243091 L666 -M743 0.191922632090202 T718 -E730 0.183615168040539 L666 -P724 0.183224102947263 M736 -V742 0.179296144325056 G679 -L731 0.178497907259764 F723 -T746 0.176588988582185 R715 -P737 0.176337422167089 Q713 -M736 0.171520364958988 G733 -M743 0.170483727372729 R664 -D673 0.169675690268321 T718 -T746 0.16302801968144 A660 -G740 0.157880017706656 V678 -F723 0.155673367670884 P724 -L731 0.155070634699063 R663 -A683 0.151972489055064 A660 -G733 0.150789416653933 S677 -R721 0.150599013943841 L675 -P681 0.149913887347697 E720 -L731 0.148144509168448 I676 -I682 0.14472057130561 V678 -V742 0.144326742433946 G679 -M743 0.143893136867847 S719 -F741 0.140503574551847 G714 -G740 0.138721216455299 W661 -V742 0.137693688018148 H717 -E730 0.137063117755507 R663 -F745 0.133517974020424 S677 -M743 0.13250063653018 R664 -F745 0.12588475645458 G714 -M736 0.123963018947774 W661 -F745 0.122744653450817 S719 -T746 0.122132476790011 R664 -G679 0.122071971614931 S719 -V742 0.12175211409672 V678 -L722 0.118606999951821 V659 -G740 0.116482933599661 S677 -L731 0.115615084761671 L666 -S744 0.115311399955412 E730 -F745 0.114338597839742 R664 -A683 0.111381832970654 R721 -N734 0.107918902086156 E730 -S744 0.107370791890012 G679 -F745 0.106340476232268 E667 -E730 0.104679545055623 G674 -P681 0.104150359359033 R663 -V678 0.104121090800083 R664 -G674 0.102830386056492 S719 -E730 0.0975510278133109 G674 -T746 0.0971677125991537 N662 -I682 0.0950159873885399 S677 -E720 0.0942611690524737 L666 -L731 0.0940437472991014 A716 -G740 0.0937544755448467 P681 -S744 0.0929520510852191 L675 -L722 0.0914398954291422 L675 -F745 0.0904500025604136 G733 -T746 0.0892831798392762 G714 -G733 0.0872752207169776 R721 -S744 0.0863268464870477 V659 -G738 0.0854398538676062 R721 -I732 0.0853039462470715 Q713 -G738 0.0806059869899544 G714 -P735 0.0800352954166179 Q713 -G733 0.0792345673146508 N662 -A683 0.0790021009652713 A716 -M743 0.0788808746062611 E667 -I676 0.077257913859377 N662 -V678 0.0749940020507367 I676 -L731 0.0734227372314189 S677 -E730 0.0706098732306923 V678 -I732 0.0699361496810225 Q713 -F741 0.0689503132237164 L666 -T746 0.0689003663231471 L675 -I729 0.0677034489167825 P681 -M743 0.0669953392000664 N662 -S677 0.066558361047921 R663 -R680 0.0621938798535623 G679 -T746 0.0611529159111277 M736 -M743 0.058645826637729 G679 -I729 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