[Mon Aug 29 18:10:45 2016] >Input file: TMQ3KNE1M1G.pdb >TM segments: 419-425_ 434-445_ 454-480 MAIDEN score = -6.4381 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I474 -V479 1.50983746592665 I474 -L480 1.33555493635995 C472 -E477 1.20231796004123 C458 -R464 1.19074115579015 H457 -R464 0.877500725741255 R420 -V442 0.876261661227558 L436 -C472 0.714675258100033 L436 -A471 0.660524887992178 A475 -L480 0.612453774091951 I422 -S439 0.587501782012037 I456 -R464 0.578674353648699 L473 -L480 0.55692472888899 R420 -I456 0.551013700604118 K440 -W445 0.539755791929547 L473 -I478 0.465843096516068 K440 -A471 0.458112907154895 L436 -M468 0.438302211165367 I422 -M435 0.396909713987645 E434 -C470 0.369665278438678 L473 -V479 0.369288805430006 I456 -T465 0.361735236667745 E441 -C470 0.351836101136538 H457 -K462 0.346218363087866 R420 -N444 0.341355238670204 K440 -M468 0.329128233723525 N444 -M468 0.302561276046135 S439 -H457 0.302542545396245 R420 -M468 0.288336419590691 A455 -G466 0.28192706435265 V419 -C458 0.280150695552575 R464 -C472 0.268555872860262 N443 -C470 0.26609390394181 M435 -K440 0.265211866176229 K440 -A455 0.261779620091466 R420 -S439 0.261352056613398 M423 -V442 0.260829315631197 S439 -A475 0.258266806505381 N443 -S476 0.250220721262471 M435 -R464 0.247441174546351 H457 -C470 0.235252631270453 L436 -T465 0.22948542448544 S439 -A455 0.227461318120774 F438 -A471 0.225469711130793 R421 -K459 0.221206191138446 R421 -K440 0.215186607243745 R421 -M468 0.208069300008807 M423 -L437 0.202608305188075 R421 -N443 0.19544008476749 I424 -M435 0.192805954281834 R464 -V469 0.190165214389651 T467 -A475 0.188525607717638 G460 -T467 0.179789459440816 V419 -V454 0.179149910105821 I456 -G463 0.175285981044777 R464 -A471 0.174913757843999 R420 -W445 0.173067947023844 K459 -T467 0.167384160532723 M423 -R464 0.164268667533163 G461 -C470 0.162497152062488 S439 -M468 0.159484381748351 D425 -T465 0.158121590501253 R420 -R464 0.153660710757535 V469 -E477 0.151540730554129 R421 -A455 0.144626652124184 F438 -C470 0.141936035464591 K459 -G466 0.141577678463038 S439 -C470 0.139184024111976 S439 -C458 0.137262967999572 I422 -E441 0.136163510726076 V442 -S476 0.130227824133068 M423 -H457 0.129135117310437 G461 -V469 0.129128181233838 M468 -A475 0.124215212154701 S439 -T467 0.123015743967025 A455 -M468 0.119822747091612 M435 -C458 0.116788721426328 A455 -L473 0.116365824600022 A455 -G461 0.115396085738059 E434 -E441 0.114915467885663 I456 -C470 0.11402020755804 K440 -T465 0.110768508228277 C470 -I478 0.110223550330353 E434 -C472 0.109916816288649 N444 -A455 0.10816859651965 K440 -V469 0.107921370879039 D425 -K462 0.107537758975319 S439 -C472 0.106561090687709 D425 -M468 0.105345647609201 N443 -A475 0.105255138370091 N443 -T467 0.104939273757609 V419 -H457 0.104595078261612 E441 -E477 0.103647962910473 G466 -A475 0.103484681059621 E441 -I456 0.103398326052536 I456 -V469 0.102356248183018 I424 -L437 0.101900688219107 V454 -M468 0.101467284787943 R421 -T465 0.0997613315067134 A471 -I478 0.0997373379722628 I424 -G466 0.0983689627651074 M435 -N443 0.0944939061524543 V419 -V442 0.0932724871624906 M435 -I474 0.0909693153066988 L437 -I456 0.0891103696079601 I456 -C472 0.0890862314233869 E441 -V454 0.0872925696331572 V454 -G466 0.086650489727092 V442 -A471 0.0861645694574706 R420 -E441 0.0852969349752923 I424 -I456 0.0837498374403238 A455 -C472 0.0831332755825317 T467 -S476 0.0828712277080894 A455 -R464 0.0826368108948214 A455 -G463 0.0825838854015584 M423 -T465 0.0825285280325837 N443 -E477 0.0818911219997629 N443 -A471 0.0808296977642535 R420 -K440 0.0802600158244218 N444 -I456 0.0780816026707229 I424 -A471 0.0773863619400603 S439 -L473 0.0738556039493456 I424 -H457 0.0728581408923218 E434 -M468 0.071435367857064 I424 -G461 0.0713069583181065 M423 -M468 0.0710629752657268 W445 -S476 0.070521691747172 R420 -T465 0.0692618967564622 I422 -C472 0.0685582615986604 M435 -T465 0.0672841028523921 I422 -L436 0.0669074204008468 I422 -K459 0.0639295936217597 M435 -G463 0.0623966541335426 V454 -C470 0.0622068216884455 I422 -V442 0.059846196585676 N443 -V454 0.0582775966041396 H457 -A471 0.0582559927605555 I424 -V469 0.0563026886014288 R421 -L436 0.0553563340665284 V419 -K440 0.0549876211841811 T465 -L473 0.0547378498014197 V442 -C470 0.054188083171093 S439 -V469 0.0528861533956544 I424 -G463 0.0525430655615499 M423 -E434 0.0502575041447137 I456 -L473 0.0502308701451428 I422 -N443 0.0495294484220072 N444 -A471 0.0492517654325604 I424 -R464 0.0490947712590293 R421 -I456 0.0484172718690878 R464 -C470 0.0479365834401495 R421 -V454 0.0467385504063038 I422 -G466 0.0456209711909779 D425 -E434 0.0446899197222557 C458 -V469 0.0446426863515654 S439 -G466 0.0442687358999951 M435 -L473 0.0430275171456627 L437 -S476 0.0386377457589802 L437 -T467 0.0382710981511736 S439 -I474 0.0382584267860215 I424 -F438 0.0357435478468053 M423 -I456 0.0332866432359156 I422 -K440 0.0328870860030261 N443 -I456 0.0326521792878034 I422 -A455 0.0312507054266753 W445 -V454 0.0310633495353478 G460 -V469 0.0302293544701175 T465 -I474 0.0287847764040774 W445 -L473 0.0281372572689887 L436 -S476 0.026839259821564 V419 -E441 0.0261253970659925 L436 -G463 0.0260056732185747 E441 -V469 0.0256796975939646 M423 -C458 0.0255074384489884 N443 -C472 0.0239503154079137 L436 -R464 0.0238299899596308 E441 -A471 0.0234639057287396 M435 -E441 0.0234610484555631 R421 -L437 0.0218039942168256 E434 -T467 0.0215819824600914 K440 -L473 0.021180044113958 A455 -T467 0.0207595840826871 F438 -I456 0.0193239039040058 M468 -S476 0.0192605573383666 K462 -V469 0.0190259435650315 E434 -T465 0.0149404769990644 K440 -A475 0.0146046881086228 N444 -V469 0.0134127915432294 K459 -V469 0.0115867656029209 V419 -N444 0.0102377359321595 E441 -L473 0.00939479834065793 M423 -L436 0.00924450633971308 E441 -S476 0.00759498519771995 S439 -T465 0.00733706315575322 D425 -G466 0.00366858549786048 V442 -A455 0.00316353041255057 L437 -T465 0.00229813089944897 F438 -T467 0.000924207916073172 G463 -L473 0.000428998447270401 K440 -E477 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