[Fri Aug 26 18:23:56 2016] >Input file: TMQ3ME33M2D.pdb >TM segments: 26-37_ 66-95 MAIDEN score = -4.1107 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V80 -F93 0.732752254350193 V80 -K91 0.716973889198634 R84 -A90 0.578755638106946 D66 -A82 0.535697374181643 C67 -K81 0.514369921156112 R84 -G92 0.501826375324047 A76 -F93 0.496936004439365 S74 -M79 0.465611049546913 K75 -K81 0.464194886061196 V80 -G92 0.401464281043402 A83 -L88 0.330442972906168 Y86 -K91 0.324384178402851 G68 -A76 0.295848056746993 R71 -N78 0.263750593937211 G68 -S74 0.248479869412025 S70 -S77 0.226326428251806 V69 -S74 0.21742691227397 S74 -A83 0.217244766083539 M79 -F93 0.21423472980876 A76 -K81 0.212623302575114 A82 -F93 0.197382480895773 R71 -M79 0.197340214502255 N78 -G92 0.187783743368033 A83 -K91 0.185052917330667 R84 -E89 0.18378950143364 A76 -R84 0.175270895533874 A83 -K94 0.166969977059876 G68 -N78 0.163985949957367 R84 -K94 0.159210027990769 A82 -G92 0.142983016545746 V69 -A76 0.139107895077698 D66 -N78 0.134231630172716 C67 -G73 0.128749274518398 V69 -K81 0.127935737094391 S77 -T85 0.11838130763551 R28 -T33 0.117284472710017 D66 -K75 0.11269110742959 A82 -A90 0.111501267553754 K81 -L88 0.109470374241429 M79 -L88 0.102449662449335 G73 -V80 0.102416201413177 S70 -A76 0.101850484434514 V69 -S77 0.0981800430159838 K81 -K94 0.0945789427190773 D66 -R84 0.0920663717485795 T85 -G92 0.089639969283515 L27 -P32 0.0887755800432313 V29 -L34 0.0818021693830897 K81 -Y86 0.0780128059975254 Q36 -R71 0.0696213087215325 D66 -S74 0.0689646081949939 R26 -T31 0.0635255855331469 C67 -N78 0.0619672503332627 R71 -A76 0.0598901647582518 S77 -F93 0.0559698980287813 N78 -Y86 0.0453706074517934 S70 -N78 0.0425047318155967 N78 -F93 0.0380004186294778 S77 -K91 0.0377664305736358 D66 -Y86 0.035270325827458 K81 -E89 0.0321802981641941 G68 -V80 0.0286983582740934 M79 -G87 0.0274085116659046 V80 -E89 0.0272562093799573 K81 -F93 0.0257832688097435 S74 -K81 0.023818963692099 S77 -R84 0.021541842064595 V69 -V80 0.0212012989702868 D66 -S77 0.0196922301209402 D72 -S77 0.0184288650926872 G68 -A83 0.0171667725081113 G68 -R84 0.0136790665135527 K75 -K94 0.0135986712826885 Q36 -G73 0.0120862572337312 G68 -T85 0.0101293255690127 K75 -A83 0.00891998142191763 V69 -A82 0.00866630401097102 C67 -A76 0.00709954055182171 A82 -E89 0.00688812885223911 A82 -K91 0.00661212143629231 V80 -A90 0.00528290329774928 S70 -K75 0.00438784717931795 V69 -A83 0.00433801296138192 N78 -T85 0.00413743556315271 K75 -G92 0.002174711741737 G87 -G92 -0.00115448947021163 R84 -K91 -0.00193574007284636 S77 -K95 -0.00259398083718243 S77 -Y86 -0.00403649595337452 G73 -N78 -0.011765708628634 G87 -F93 -0.0165565997158827 S77 -K94 -0.0171952376665204 Y86 -G92 -0.0218424251500737 E89 -K94 -0.0235843844861019 G68 -M79 -0.0342611147789738 A76 -K94 -0.0366833824630985 K81 -A90 -0.0369501352223025 C67 -G87 -0.0372113627948902 A76 -K91 -0.0375992095959217 K75 -F93 -0.0381470805791109 S77 -G87 -0.0386828651846529 G68 -G73 -0.0392979266173521 A76 -T85 -0.0415843662095779 D66 -V80 -0.0428547382562057 M79 -Y86 -0.0449207522509832 M79 -A90 -0.0505330051593473 N78 -G87 -0.0538820499872337 S74 -A82 -0.0582279517219595 R28 -L34 -0.0587464501602274 G73 -A82 -0.0602383391625896 D66 -R71 -0.0636582761851026 S74 -F93 -0.0640509078046931 V80 -K95 -0.0736338373891403 A82 -L88 -0.0739112679733083 T85 -F93 -0.0769903306473321 D66 -G87 -0.081992507778418 M79 -R84 -0.084220286327608 K75 -V80 -0.0842251153965723 V69 -N78 -0.085500357081167 D66 -T85 -0.0901012939890313 V80 -T85 -0.0923688937607396 D72 -N78 -0.0940792779658959 L88 -K94 -0.0950609791381076 C67 -S77 -0.0969497872902023 A82 -K94 -0.100829267992132 L27 -T33 -0.107033319578203 D66 -A83 -0.109258553831165 A76 -G92 -0.110483695783971 G87 -K94 -0.11101097429572 C67 -D72 -0.112304133585692 A76 -K95 -0.11274248191428 D66 -G73 -0.112918467607533 L88 -F93 -0.117154516532603 M79 -G92 -0.118187736329918 T85 -A90 -0.125237997134081 Y86 -F93 -0.127341522414547 K75 -R84 -0.129346977745107 G73 -K81 -0.13092980434586 T85 -K91 -0.131663584341252 D72 -M79 -0.133726647035871 S70 -M79 -0.1391149950036 A83 -K95 -0.140056320675632 G73 -M79 -0.141863544785854 K81 -G87 -0.14277984950384 D66 -A76 -0.143295336139585 S77 -G92 -0.147228059821068 G68 -S77 -0.150315783887409 G68 -K75 -0.150496276014727 C67 -A82 -0.152484903896702 C67 -S74 -0.156638289477196 A90 -K95 -0.162235890655839 N78 -K94 -0.162325377157551 D66 -M79 -0.16351393456946 N78 -K95 -0.163934244698378 A83 -A90 -0.165605378164794 G68 -K81 -0.166707603387334 M79 -K91 -0.167095484023111 N78 -L88 -0.173588609348048 D66 -K81 -0.173711695412323 K75 -K95 -0.176357591754397 M79 -K95 -0.186751538839027 M79 -K94 -0.187468866361942 V80 -G87 -0.187922460609417 S77 -L88 -0.191363246509531 A83 -E89 -0.195083473315183 K81 -G92 -0.200886613764519 R84 -F93 -0.204828616626935 A76 -A83 -0.206125181797686 V80 -K94 -0.210019443638281 S77 -A83 -0.215110360693051 N78 -R84 -0.222254025777108 C67 -Y86 -0.22444928986601 N78 -K91 -0.224777591543511 V69 -K75 -0.229481010579036 A83 -F93 -0.231242004947981 V80 -L88 -0.235240479193831 N78 -A83 -0.235543285093839 A82 -G87 -0.236451093425748 C67 -V80 -0.241886240175868 C67 -A83 -0.241998607419632 A76 -A82 -0.247528704929466 K81 -K95 -0.261917319092051 A83 -G92 -0.266175451102319 C67 -M79 -0.266565112001567 K75 -A82 -0.275095569364126 M79 -T85 -0.311525615447707 C67 -K75 -0.316560035540765 V69 -M79 -0.319821668176715 S74 -V80 -0.364851665271582 K81 -K91 -0.380713093235652 V80 -Y86 -0.386546209035598 G68 -A82 -0.48241962451277 C67 -T85 -0.495759851038308 S77 -A82 -0.533927902387409 C67 -R84 -0.593949906014458