[Fri Aug 26 18:27:51 2016] >Input file: TMQ3T113M3D.pdb >TM segments: 135-149 MAIDEN score = 1.6921 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C143 -N148 1.11373083829117 C143 -P149 0.379085751335451 V142 -N148 0.317893864678142 N144 -P149 0.278527950364548 L141 -P149 0.126746872121476 V142 -S147 0.0990467733672906 E135 -K140 0.092885174634509 L141 -S147 0.0413476009673939 K140 -S147 0.013405213380052 V142 -P149 -0.013630804167974 L141 -N148 -0.166198324035575 K140 -V145 -0.175533667307826 L141 -K146 -0.188118737684804 K140 -N148 -0.227090219762086