[Mon Aug 29 16:44:47 2016] >Input file: TMQ3UP23M1G.pdb >TM segments: 25-31_ 35-40_ 144-149_ 189-194_ 200-207 MAIDEN score = 33.0448 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- N36 -V149 10 M38 -K147 10 S31 -R189 10 G39 -H201 3.35365780696702 M38 -L146 1.71100681273713 S31 -L190 1.14142039262705 Q27 -L192 1.07601399797872 L29 -V191 0.961635239654736 N36 -L148 0.863781939113736 L29 -L190 0.832539380463986 L29 -L192 0.774951979657239 L192 -H201 0.766478226630816 G39 -V144 0.674602840912885 M38 -V204 0.633262535945489 L29 -R189 0.599478441537677 S30 -L190 0.587242390018231 G37 -F206 0.580820751796942 M38 -F205 0.56306096572407 G37 -V149 0.529114018341552 N40 -Q145 0.483772935126191 T35 -F206 0.44988962949251 S31 -V191 0.400546995016294 N40 -K147 0.392662727641547 M38 -L203 0.38899540731582 T28 -V191 0.358457890172267 T35 -L148 0.355598309376207 T28 -L192 0.353658602321208 S30 -R189 0.310815485930182 G39 -L203 0.308437473803915 G39 -N200 0.283851737396436 M38 -L148 0.283075705450949 N36 -F205 0.272522776037198 G39 -M202 0.259403003617893 G37 -L146 0.258863220170408 S31 -N36 0.245218678208577 G39 -L146 0.229600231248545 S30 -H201 0.220584942983792 V191 -M202 0.207061311954813 N36 -R189 0.199788717494354 L29 -G37 0.1995864598402 Q27 -N200 0.196906424402655 S30 -V191 0.196101381650656 S30 -N200 0.183998961371842 V191 -F206 0.181931075955384 G37 -M193 0.179013315629076 N40 -L146 0.172533986158618 N26 -M202 0.15311248934858 N200 -F205 0.15017923312086 L146 -M193 0.146274316249557 N36 -L203 0.146253458884448 N40 -I194 0.14321263159865 T35 -V149 0.137671893724934 L146 -N200 0.13323339356411 L148 -V204 0.129632737427705 Q145 -H201 0.129536342362579 T28 -N200 0.127143406264992 S31 -V204 0.126538641024887 Q145 -F206 0.121844528421845 L192 -L203 0.119528329022947 R189 -A207 0.118081616494244 T28 -R189 0.116397636388541 M38 -F206 0.115009771422935 L190 -A207 0.112484289274744 L29 -L203 0.110270741719449 T28 -V204 0.109437061693795 G39 -V149 0.105962537774996 L190 -V204 0.10391432750794 K147 -L190 0.101857047087921 N36 -L192 0.0954318852856135 V25 -I194 0.0944398605394348 L146 -I194 0.0938017842234385 N40 -L203 0.0937764726204282 G39 -V191 0.0914712478868491 V149 -V204 0.0826872546975572 L146 -M202 0.0810406351151296 L190 -F206 0.0801368357072136 V149 -V191 0.0778827643237712 Q27 -M202 0.0775926500152866 L148 -R189 0.0754898855253611 K147 -H201 0.072726340501144 V25 -N200 0.070170819772511 M193 -M202 0.0700467430097605 Q27 -R189 0.0697662341544449 V191 -N200 0.0681542328614273 Q27 -L190 0.0646762564820769 Q27 -V204 0.0639345826993989 K147 -L203 0.0628672394564722 L148 -F206 0.0610595503920601 M38 -M193 0.0607335737092734 L29 -G39 0.0598858861481136 T28 -M202 0.0559262792016718 N40 -V144 0.0542145350603091 N40 -M202 0.0536140282784734 G37 -L148 0.0533991467480561 L29 -A207 0.0512233902490402 T35 -L190 0.0438343602084235 N26 -N200 0.043680560108345 S30 -G39 0.0428441327904983 G39 -L190 0.0411486104590502 S31 -M193 0.0386196875678877 V144 -L203 0.0364368859480848 V144 -N200 0.0321698521907778 V144 -F205 0.0304908867007256 K147 -F205 0.0299189451523936 L148 -M202 0.0295597576934137 M193 -V204 0.0243628258545172 L192 -F205 0.0233345531631963 G39 -I194 0.0229705733650523 L190 -H201 0.0209914509619181 S30 -M38 0.0206828386352029 N36 -L190 0.0175545116607534 S30 -N36 0.0155158618983698 R189 -F206 0.014352158033475 L29 -T35 0.011291826619515 S30 -M193 0.0110514094739611 S31 -M38 0.00713543513596226 V191 -V204 0.00703938149686056 Q145 -L192 0.006101772200787 K147 -L192 0.00591996614054313 G37 -R189 0.0029025488233434 V191 -F205 -0.000915522672437996 N40 -H201 -0.00117512154917421 Q145 -N200 -0.0018368887767295 G39 -A207 -0.00312959152882453 M202 -A207 -0.00427288502784151 K147 -F206 -0.00524576535899879 L29 -N36 -0.00919371634054045 L148 -H201 -0.00998251313783083 T35 -L146 -0.0109747492857908 M38 -Q145 -0.0113716668690693 S31 -V149 -0.0114258166559278 G37 -A207 -0.0128755000204945 S30 -M202 -0.0153107895762954 N26 -V191 -0.0183454814702415 N40 -V191 -0.0189628242577002 T28 -H201 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-0.0769869987327888 T35 -V191 -0.0772736113099077 T35 -L192 -0.0780138777776513 V25 -V191 -0.0799809082490024 V149 -R189 -0.0846669536774769 L192 -F206 -0.0860632858251336 Q27 -L203 -0.0890365505364179 L148 -M193 -0.0890654505958084 G37 -M202 -0.0897241230459733 T28 -L203 -0.0898252256602712 L190 -M202 -0.0902070467761242 L29 -F205 -0.0916398632492484 N40 -V204 -0.0940202319857772 S30 -L203 -0.0953954319040409 Q27 -G39 -0.0975719475601955 G39 -M193 -0.099292840706394 S30 -T35 -0.100065842393499 V191 -H201 -0.101078604985722 L190 -F205 -0.102203707893939 T28 -F206 -0.104796657081711 L146 -V191 -0.10480083714684 G37 -L192 -0.104940134867299 S30 -L192 -0.105677642041417 L29 -M38 -0.106058943256985 T28 -F205 -0.12403645466609 L29 -I194 -0.12617635158803 L148 -F205 -0.126630321688303 N26 -M193 -0.12793272541183 G39 -K147 -0.128779342250246 I194 -N200 -0.131925011352891 L146 -F206 -0.136248390576229 N40 -F205 -0.137712970528848 H201 -F206 -0.137966756643012 N40 -L192 -0.138444382342617 M38 -V191 -0.139535002033867 M38 -N200 -0.139800207956078 L148 -L192 -0.140448678175019 R189 -F205 -0.144169907015977 T28 -N40 -0.144280369793597 G37 -V191 -0.144695667890751 Q27 -H201 -0.145466293914963 Q145 -M202 -0.145905924585452 L148 -V191 -0.146840018116082 L146 -A207 -0.149351010277369 S30 -G37 -0.150039305887678 N36 -K147 -0.151858324026072 L29 -F206 -0.152496230033463 S31 -G37 -0.153806171042355 N40 -F206 -0.153922262353354 L192 -M202 -0.154024819495309 N26 -L192 -0.154757343041263 N26 -H201 -0.154989607472087 L146 -H201 -0.15614033447482 K147 -V204 -0.15799727521068 N36 -F206 -0.15970459445688 N40 -M193 -0.16189388311546 S30 -L148 -0.16243877611265 N36 -M202 -0.163919437008814 G39 -F206 -0.164134221840093 L148 -L203 -0.164210817588705 G39 -F205 -0.165479285157311 Q27 -N40 -0.166005256099663 L192 -V204 -0.167644536009122 Q145 -V204 -0.168447760697184 K147 -V191 -0.168762452564959 V149 -L190 -0.168938020640203 S31 -L192 -0.174700018030173 M193 -H201 -0.177947790870221 L148 -A207 -0.178668236352299 S31 -F206 -0.178778866084132 L148 -L190 -0.18266516797047 G37 -N200 -0.185149427127696 K147 -M202 -0.190914169432085 M38 -A207 -0.19093607072795 L146 -V204 -0.192767231550807 K147 -A207 -0.200346515771119 S30 -A207 -0.201245275030079 M38 -I194 -0.204774455335247 V144 -M202 -0.206232681662644 Q145 -F205 -0.212433771041033 V25 -L192 -0.215663492056179 I194 -M202 -0.217971718625595 S31 -A207 -0.221670122497601 L192 -N200 -0.222212717586988 L29 -V204 -0.224610400557605 L146 -L192 -0.225844095216448 R189 -V204 -0.226285134576781 M38 -L190 -0.227111331665298 M38 -R189 -0.229300745891043 V25 -H201 -0.231638728167104 G39 -Q145 -0.233132755179242 G39 -V204 -0.243082089000605 M38 -V149 -0.247389822649138 G39 -L148 -0.248106649712314 S30 -V204 -0.250216946171348 G37 -H201 -0.254243374293866 L29 -H201 -0.254892294169749 M193 -N200 -0.263486643746945 S30 -F206 -0.268409836911591 T35 -K147 -0.269621241342626 M38 -M202 -0.2729107657762 V149 -F206 -0.275414201128994 G37 -L203 -0.279974684419233 T28 -L190 -0.296576210823445 V144 -H201 -0.29938164140471 N26 -I194 -0.301020865253406 V149 -A207 -0.310872138600994 G37 -F205 -0.312385823714354 N36 -V204 -0.322360549324753 G37 -K147 -0.325708630862412 T28 -M193 -0.328684657994556 M38 -V144 -0.337076166362499 Q27 -M193 -0.339042732891525 I194 -H201 -0.353467294378497 G37 -Q145 -0.365356345121451 M38 -L192 -0.366296149682364 N36 -A207 -0.376965670491811 G37 -L190 -0.415753318141892 G39 -L192 -0.41980630636942 Q145 -L203 -0.449050066168953 T35 -F205 -0.460861695402682 N40 -N200 -0.524469902240097