[Fri Aug 26 16:36:57 2016] >Input file: TMQ3V0Q7S2D.pdb >TM segments: A178-227 MAIDEN score = 5.4194 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C194A-V217A 2.86871995116435 F195A-K216A 2.07681996665277 A193A-K216A 1.070413411031 W199A-L212A 1.04190156754254 F195A-V217A 0.906351142556479 R201A-N207A 0.646601791144608 A193A-F219A 0.606466111671253 Q190A-H218A 0.576830596059549 F195A-E214A 0.561801905978384 W199A-I211A 0.556564194711034 I196A-K216A 0.538681398994691 W199A-G208A 0.502404278018261 W199A-T209A 0.472668005754473 E204A-T209A 0.433498845261871 G200A-T209A 0.428678940222241 W199A-Q213A 0.414192979338246 S197A-E214A 0.403099740727836 C179A-K187A 0.344952887322872 G200A-E205A 0.341821342148013 D189A-F219A 0.340119053774354 Q190A-E223A 0.337104534821002 K187A-S221A 0.328483069353271 D189A-H218A 0.3123053012713 I178A-C194A 0.294089665292653 G198A-E214A 0.270216108029386 L188A-H218A 0.254058074366316 D189A-V217A 0.251967828176566 T202A-T210A 0.251137011172135 S197A-A215A 0.2469043959982 K187A-H218A 0.246461058103207 Q186A-T192A 0.243721220863022 G208A-Q213A 0.236308692202301 G198A-N207A 0.220119223677664 S197A-L212A 0.215922529870058 T202A-Q213A 0.209606595523947 I196A-A215A 0.20476560279663 C179A-Q186A 0.194995451369384 R201A-T209A 0.193334637287592 N191A-R222A 0.19305807375589 K187A-C194A 0.192067053303056 S197A-V217A 0.180745227486856 T192A-I220A 0.174296574054792 R201A-G208A 0.171180575770963 I178A-I196A 0.159429517483802 V217A-V224A 0.141812418861236 T192A-S221A 0.131882966248538 N191A-E223A 0.126079852283478 I220A-S226A 0.125566791276454 W199A-A215A 0.120570115253005 C194A-S221A 0.120001236484035 W199A-E214A 0.117250675786687 S197A-T210A 0.116390214414759 T192A-V224A 0.112295085054206 S197A-T209A 0.108111660313163 A193A-S221A 0.106298390185171 F195A-A215A 0.105810248527261 Q190A-S221A 0.103537339591936 I196A-H218A 0.101136702040213 L188A-V217A 0.100782546698389 K187A-F219A 0.0999778270713718 K187A-T192A 0.099814095798108 G198A-K216A 0.0940503011091754 L188A-I196A 0.0938017842234385 Q190A-I220A 0.0880674623898141 L188A-F219A 0.0783685186276557 S197A-G208A 0.0766755067737304 N191A-I220A 0.0764636187285523 I196A-V217A 0.0735706268197562 T192A-F219A 0.0668395775136406 R203A-T210A 0.0646323383665243 H218A-V224A 0.0627676510728037 G200A-A215A 0.0606732103079466 I220A-S227A 0.0577153945364369 H218A-E223A 0.0561994690242076 G198A-E204A 0.0537544016377582 R201A-G206A 0.049621308179574 Q190A-V217A 0.0484332890586303 W199A-N207A 0.0442413682598231 Q190A-V224A 0.0438598361770737 I178A-F195A 0.0436317810715785 A193A-H218A 0.0424917066235917 T202A-I211A 0.0376708641750252 F195A-L212A 0.0328863461376983 L188A-F195A 0.0276590717076877 D189A-I220A 0.0268085222645138 T202A-N207A 0.0261468484543219 I196A-E214A 0.0214791084319197 H218A-C225A 0.0162318110390753 D189A-R222A 0.0108621609996047 C194A-R222A 0.010537304661416 R201A-E214A 0.00749022891504847 C179A-F185A 0.00742515644420427 S221A-S227A 0.00672165640950384 T192A-A215A 0.00118587508118795 V184A-D189A 0.00114058746512313 T192A-R222A -0.00269616969352349 S197A-T202A -0.007321505643056 I178A-S197A -0.00782553166551914 I196A-R201A -0.0183624170600023 S197A-H218A -0.0210773475975441 G183A-L188A -0.0222234060286945 W199A-T210A -0.0250526205126178 V217A-C225A -0.0255648206906578 F195A-I220A -0.0263624384576513 W199A-G206A -0.0265194796766219 P181A-D189A -0.0314688205432951 D189A-F195A -0.0333295857693603 K187A-I220A -0.0353761165021544 R203A-G208A -0.0384066350582299 G200A-E214A -0.0467320764273271 G198A-T210A -0.0475741627969009 A193A-E214A -0.0510619420158833 K187A-R222A -0.0535432926649815 F219A-C225A -0.0571063294252177 F182A-L188A -0.0587823345291181 G198A-Q213A -0.0600849287996044 T202A-G208A -0.0613990035231446 I178A-Q186A -0.0630511461708503 S221A-S226A -0.0675935901878066 D189A-S221A -0.0682014315296193 G200A-Q213A -0.0703816318325368 F219A-S227A -0.0726857655449926 S197A-K216A -0.07274799879015 F219A-S226A -0.0801518776947581 C179A-L188A -0.0820277226948591 N191A-V224A -0.0821308657777164 R201A-T210A -0.0831148931045451 T202A-L212A -0.0889039632269801 Q186A-F219A -0.0914505381172117 I196A-I211A -0.0932277387989817 G198A-V217A -0.0974579540801859 Q190A-F195A -0.0977735290574753 I196A-F219A -0.0992346201438861 Q190A-C225A -0.0994748366990588 C194A-K216A -0.0995987003675696 R222A-S227A -0.104442161918992 E204A-T210A -0.105468204946115 W199A-E205A -0.106291246974962 F185A-Q190A -0.106472331132113 L188A-S221A -0.106878984861684 R201A-Q213A -0.112246141213841 V217A-R222A -0.115849703901143 L188A-R222A -0.117064396054745 G200A-G208A -0.118123251392737 C194A-A215A -0.121225160797639 R203A-T209A -0.121316684771823 K187A-A193A -0.124056792403549 C179A-V184A -0.124567680708686 N191A-F219A -0.129814175315685 L180A-L188A -0.130163357660152 F195A-H218A -0.130943855556147 N191A-S221A -0.136619511238081 Q190A-R222A -0.137439900795078 F195A-F219A -0.141862327105186 F195A-Q213A -0.142378088481676 G198A-R203A -0.14282384426433 N191A-K216A -0.146574198095162 Q186A-N191A -0.149952180446701 W199A-E204A -0.152475383691363 T192A-K216A -0.153755174450693 Q186A-C194A -0.158060698478881 A193A-V217A -0.162410202094369 G198A-A215A -0.162413634681969 G200A-N207A -0.166769529140635 R201A-L212A -0.174298511666411 G198A-G208A -0.174340076521578 G200A-G206A -0.174797648912163 L188A-A193A -0.180273707780034 R201A-A215A -0.182547570006239 N207A-L212A -0.189164328567859 G200A-L212A -0.190347710937711 L180A-Q186A -0.192241495414235 C194A-Q213A -0.195410741104798 S197A-I211A -0.195421712876068 A193A-I220A -0.195708845731284 Q190A-K216A -0.196169145026697 A193A-A215A -0.197605508906617 C194A-H218A -0.1976261090105 F182A-K187A -0.199928193172791 D189A-V224A -0.20453056051362 L180A-K187A -0.206708505189937 G198A-I211A -0.209148708690863 T202A-T209A -0.210204864716007 G200A-T210A -0.212384769945699 L180A-F185A -0.21378900036891 G198A-L212A -0.214098843177486 T209A-E214A -0.216003216110203 C194A-I220A -0.217231143073159 G200A-I211A -0.21967457963889 T192A-V217A -0.225073303458333 N191A-H218A -0.225288579589827 G198A-T209A -0.232951455932821 P181A-Q186A -0.261043228295918 C194A-F219A -0.266208790188745 N191A-V217A -0.2713632205626 N191A-C225A -0.286271600367364 R201A-I211A -0.313891389042833 D189A-C194A -0.315768243180576 I196A-Q213A -0.318189299432614 I196A-L212A -0.359548885726853 C194A-E214A -0.365828948093994 F219A-V224A -0.370653403251151 P181A-K187A -0.404010197461041 P181A-L188A -0.405633738112629 I220A-C225A -0.409664207410543 L188A-I220A -0.417884367344946 Q190A-F219A -0.439070809325226 L188A-C194A -0.544007298830316 T192A-H218A -0.615477739974246 S197A-Q213A -0.639833800538456