[Fri Aug 26 16:46:55 2016] >Input file: TMQ47FP1M2D.pdb >TM segments: 146-167_ 193-217 MAIDEN score = -3.3919 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C162 -S167 1.19100074405829 P152 -E160 0.481078345782552 G148 -L154 0.36851920837466 L147 -Q153 0.323853244821086 S207 -G215 0.287431695067352 P152 -E159 0.277655631982281 S207 -G213 0.250035321505102 K149 -Q156 0.246426635052938 K149 -R157 0.238678980013181 P152 -R157 0.221370699621362 S146 -V151 0.21188569072735 G206 -N217 0.211410813298911 Q205 -K216 0.205458181019982 N155 -R193 0.189964603228867 V161 -R193 0.189638614782728 T199 -Q205 0.1794285559909 E159 -R193 0.175666383352557 A163 -V194 0.158599282430217 L154 -E159 0.155528744313743 A208 -G215 0.153930065118615 V151 -Q156 0.148372891501285 P152 -S207 0.140738011439661 G206 -K216 0.13736447136168 N155 -A163 0.134064992771579 I158 -R193 0.132749240549369 L198 -H204 0.131301200776857 A208 -N217 0.128849919444623 Q205 -R211 0.125919991800212 L197 -H204 0.114985489867197 Q156 -L164 0.113083051971801 P152 -G206 0.111159052310038 Q156 -V194 0.104081743157372 S207 -I212 0.099774638426059 V151 -G206 0.0989378088775943 Q205 -G213 0.0982038918818167 Q156 -C162 0.0967064409865632 L154 -E160 0.0944031521412334 S207 -N217 0.0904167590738574 I158 -S167 0.086447305574497 L147 -R157 0.0860234274997587 T199 -G206 0.0814374678266265 V161 -V194 0.080551749403444 G206 -G215 0.0792262658480343 L164 -R193 0.0776208783221813 H204 -K216 0.0773625539864859 I158 -L197 0.0737787842794431 L147 -N155 0.0706140161186939 R157 -T165 0.065798616971745 G148 -R157 0.0642133267294902 S167 -D195 0.0629846241836787 T165 -R193 0.0625342098707016 G148 -N155 0.0577745033480996 E159 -D195 0.0475761004902342 S146 -P152 0.04570776005668 Q156 -A163 0.0454521189651191 G206 -I212 0.0444171929027477 G148 -I158 0.0423838328068378 A208 -I214 0.0417692507045913 K149 -I158 0.0405953486145614 Q153 -E160 0.0357085130938928 G166 -V194 0.035241989149724 H204 -G213 0.0346935093342113 L150 -N155 0.0344487479263154 N155 -C162 0.0304026307308822 S146 -L154 0.0274195912551312 V151 -E159 0.0240556987499386 I212 -N217 0.0231714650109538 Q156 -S167 0.0222452734907561 Q156 -T165 0.0181300794916628 K149 -L154 0.0180785832428496 E160 -V194 0.0173057749232393 G166 -R193 0.0118478618308812 N155 -V194 0.0105077455597913 G206 -R211 0.0104570039539825 Q156 -R193 0.0098322814575198 S207 -I214 0.00509284068546378 R157 -C162 0.000820535013439372 I158 -G166 0.000791006732658417 T165 -V194 0.000309903231075381 Q153 -V161 -0.000784831708968259 E160 -S167 -0.00127699807530535 G166 -D195 -0.00174959622889637 V194 -T199 -0.00473657778179026 L209 -G215 -0.00829142690428664 Q205 -A210 -0.0137171075965732 A210 -N217 -0.0155128941973526 C162 -R193 -0.0163842165232009 E159 -S167 -0.0174172009270335 G148 -E160 -0.0176868915487853 L154 -C162 -0.0177491968836985 E160 -R193 -0.0184223757698886 K149 -N155 -0.0216436463818575 A210 -G215 -0.0236180890562361 T202 -S207 -0.024781974841479 Q205 -G215 -0.0251443430876935 G148 -Q156 -0.0278239392766069 Q156 -V161 -0.031173451485804 N155 -E160 -0.0341865670715453 L200 -Q205 -0.0367306621419683 V151 -Q205 -0.0397623020464439 A208 -G213 -0.0408990898610995 V161 -S167 -0.0430467387017116 T199 -H204 -0.0431179015158151 R157 -S167 -0.0449353071453028 L154 -R193 -0.0492035642011835 G148 -E159 -0.0510512626928334 L197 -P203 -0.0513704280690117 A208 -K216 -0.0566288534624091 S167 -R193 -0.0567181859869264 I158 -D195 -0.0621517107358542 Q153 -E159 -0.0623899029663491 R157 -R193 -0.0667054665424955 L147 -Q156 -0.0684550278818475 V151 -S207 -0.0688642415525131 V151 -H204 -0.072528894317597 P152 -V161 -0.0745858930890267 Q205 -N217 -0.0750532983615115 C162 -D195 -0.0799373810089961 E159 -L164 -0.0812506281032706 L209 -N217 -0.0852503622522303 S167 -W196 -0.0881760318518778 L197 -T202 -0.0890279392271287 N155 -L164 -0.0912642407248123 L154 -A163 -0.0934971975575944 L198 -Q205 -0.0943720655511694 L209 -K216 -0.0959813797199232 R157 -G166 -0.0964109243583087 E159 -W196 -0.100875868016418 L209 -I214 -0.100910493946905 G206 -G213 -0.101561133874254 V151 -G213 -0.103651187073633 L150 -G213 -0.104021193004286 G206 -I214 -0.105226353025056 E159 -V194 -0.106032574037624 E160 -T165 -0.120385691639423 L150 -I158 -0.122564684521668 R157 -V194 -0.124333268267111 G148 -Q153 -0.127824911893142 Q205 -I214 -0.132106338994129 A163 -D195 -0.13402139937322 V151 -R157 -0.134687990187055 I158 -W196 -0.137750817293487 S146 -Q153 -0.137931188857848 Q205 -I212 -0.139125724965252 S207 -K216 -0.156418789599697 R211 -N217 -0.158420159551313 L150 -E159 -0.159012031211305 N155 -L197 -0.164697294273022 R193 -L198 -0.164991019670055 E159 -L197 -0.165026469197432 A163 -R193 -0.173001297608847 V151 -I158 -0.185996107118917 Q153 -C162 -0.18653165979667 L150 -R157 -0.189464951484865 V151 -E160 -0.191243631624584 I158 -T165 -0.191417056154892 V161 -G166 -0.191711397750664 I158 -V194 -0.201098779647353 E159 -G166 -0.202555450715074 R157 -A163 -0.203022840709656 E159 -T165 -0.203360617083655 E160 -G166 -0.204894839514916 R157 -L164 -0.209983585263515 C162 -V194 -0.212153067318502 N155 -H204 -0.22023206685944 Q153 -I158 -0.230073696911755 H204 -N217 -0.234794025525159 R211 -K216 -0.242615038940136 L147 -L154 -0.255741263922975 N155 -V161 -0.265244190286333 C162 -W196 -0.267786090571478 L147 -P152 -0.269176651854936 P152 -I158 -0.278657844369777 L154 -V161 -0.288791323961385 A210 -K216 -0.328285574656262 S167 -V194 -0.333433727266866 I158 -A163 -0.341496833528616 L198 -P203 -0.411739230534391 I158 -L164 -0.417909829432194 L150 -Q156 -0.499972486878095