[Mon Aug 29 17:08:31 2016] >Input file: TMQ4QAT6M1G.pdb >TM segments: 1278-1325 MAIDEN score = -0.2527 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A1285 -R1292 0.989715455236839 L1283 -Q1288 0.971669307469835 T1295 -V1302 0.940043851272996 E1309 -A1314 0.787600534199427 S1320 -S1325 0.620117689664851 V1305 -A1312 0.568497318176845 E1298 -A1303 0.533196300380773 F1317 -L1322 0.529262663623661 V1291 -A1296 0.508025411927632 R1292 -A1300 0.490172387029158 V1291 -A1299 0.470478589745343 E1310 -G1315 0.430051932077116 A1285 -A1299 0.379175073905098 T1295 -A1300 0.35712307985265 A1304 -A1311 0.343822019108934 D1284 -R1292 0.340834211498413 S1293 -A1299 0.335219696155864 T1295 -A1303 0.331942311909451 Q1288 -E1298 0.324146380285196 P1294 -A1303 0.319715035535618 S1289 -A1300 0.312962279363805 A1297 -A1304 0.307930780040104 A1285 -A1296 0.299141450429975 M1308 -D1316 0.293251615676591 A1279 -A1287 0.275018265091254 T1295 -P1307 0.265296499801424 V1305 -E1310 0.25679275871437 V1302 -P1307 0.251366708628469 D1284 -V1291 0.241473957941194 S1289 -A1301 0.211614539730651 G1315 -V1321 0.210700820724635 A1297 -V1302 0.197339759305684 A1287 -S1293 0.181778109805963 A1312 -F1317 0.179329242142382 S1313 -L1322 0.168846073814007 P1294 -A1301 0.167959846332205 A1301 -G1315 0.167642553159557 E1280 -A1285 0.160677777770138 V1305 -A1314 0.15900558497521 A1299 -A1304 0.158290341175751 V1306 -D1316 0.153761988325377 V1291 -V1305 0.144294677487188 R1292 -A1304 0.143527083460615 A1314 -S1325 0.141767796844171 S1293 -V1306 0.130808339104038 A1303 -A1312 0.129149561623128 A1296 -P1307 0.125311867594785 S1293 -E1298 0.123514676741791 E1298 -V1305 0.11611347936815 A1301 -V1306 0.115743980816273 A1314 -L1324 0.111876069266829 L1283 -S1289 0.110993834530132 F1278 -Q1288 0.11083194517732 L1283 -L1290 0.110617594787675 A1314 -V1321 0.107048748600545 P1294 -P1307 0.105561571020491 P1307 -G1315 0.104919054295963 E1280 -Q1288 0.0972751205384035 R1292 -A1299 0.0961888362267498 H1281 -A1286 0.0960009871982095 V1302 -A1311 0.0922466755590534 A1296 -V1305 0.0916229724051527 A1299 -P1307 0.0908568579387659 L1283 -V1291 0.0887618780248847 A1304 -E1309 0.0857628012902856 A1297 -M1308 0.0794043361447576 A1296 -V1306 0.0769665647277975 S1313 -A1319 0.0766721435748665 S1289 -E1298 0.0753163565409327 A1279 -S1289 0.0732870243060502 A1300 -A1312 0.070573658816973 A1296 -A1303 0.0702247442197272 A1286 -S1293 0.0682813437734069 A1296 -A1301 0.066441185237605 P1294 -M1308 0.0642537440886044 E1309 -G1315 0.0642120099968502 A1311 -D1316 0.0641674870738695 E1298 -A1304 0.0626948118469819 S1289 -A1297 0.0617582671075976 G1315 -L1322 0.0582785612368337 S1293 -A1301 0.055887768554399 Q1288 -A1296 0.0506974285425499 G1315 -S1325 0.0499712317725884 E1309 -F1317 0.0490926693760936 A1286 -A1299 0.0474965897313411 Q1288 -A1299 0.0471418705496294 A1318 -V1323 0.0443924862625451 T1295 -E1309 0.0424615042242626 H1281 -A1287 0.0422541662855429 L1290 -A1297 0.0351760135901225 E1298 -M1308 0.0340106359454224 S1289 -P1294 0.0323097299249522 R1292 -V1305 0.0319133688290254 D1284 -L1290 0.0318184154481429 A1314 -L1322 0.0303436744022294 V1302 -G1315 0.0302760591419973 D1316 -L1324 0.0264498098402282 V1302 -A1312 0.0261756229925005 A1300 -V1305 0.0224611127373571 F1278 -D1284 0.0212657589918575 A1287 -A1296 0.02075943737277 A1301 -A1312 0.0192230833224318 V1302 -E1310 0.0171547966957764 E1298 -V1306 0.0167407601385004 H1281 -Q1288 0.0160100478298464 E1310 -F1317 0.0135670810170918 A1296 -M1308 0.0119017003216424 D1284 -S1293 0.0112186960642596 A1285 -T1295 0.0108537571620424 S1313 -S1325 0.00564634055962898 V1306 -A1314 0.0049354790001066 A1285 -A1300 0.00459059855648292 G1315 -L1324 0.00373483741799552 L1282 -S1289 -0.000870790401863854 A1285 -A1297 -0.00159387777851183 F1278 -A1286 -0.00174099772216074 D1316 -S1325 -0.00235527528039259 V1291 -A1303 -0.00469345834630652 A1304 -S1313 -0.00771561756710515 P1294 -V1302 -0.00778544305967843 A1311 -F1317 -0.00807439028961654 A1285 -P1294 -0.00849895461350458 Q1288 -A1300 -0.00881750606992604 R1292 -A1297 -0.0131371079311143 Q1288 -A1301 -0.0141895251451833 L1282 -Q1288 -0.0153974601077502 A1299 -M1308 -0.0163897034408702 A1286 -R1292 -0.016447386915987 S1289 -A1299 -0.0193183433151178 V1291 -A1304 -0.0219417147807928 F1278 -A1287 -0.0225199172987693 A1318 -L1324 -0.0244983890132131 A1286 -T1295 -0.0281616330010455 A1312 -A1318 -0.0286684977343881 P1294 -V1305 -0.0309688233894549 A1300 -E1309 -0.0314408495577894 V1302 -M1308 -0.0316748570239884 T1295 -M1308 -0.0318431304716853 A1297 -E1309 -0.0335750504152679 A1285 -L1290 -0.0353311960574303 D1316 -V1323 -0.0384791619842053 M1308 -G1315 -0.0397580580719676 S1293 -V1302 -0.0420822568468984 A1287 -T1295 -0.0424338281288991 L1290 -A1299 -0.045076771370864 A1296 -V1302 -0.0455723389166907 F1278 -S1289 -0.046247329855722 P1307 -A1314 -0.0466959927098425 Q1288 -A1297 -0.0476131948819409 A1286 -E1298 -0.048426033743334 A1299 -E1309 -0.0500361385573673 A1279 -V1291 -0.0503204480040558 E1309 -A1318 -0.0548241420016264 P1307 -D1316 -0.0553516564683422 A1297 -A1303 -0.0557363374054318 A1286 -A1296 -0.0561023770277309 E1310 -A1318 -0.0570464859524757 R1292 -E1298 -0.0576671432170053 A1301 -E1310 -0.057826567018076 A1301 -E1309 -0.058839970451694 V1302 -S1313 -0.0602510888462406 A1301 -A1311 -0.062407352035541 L1283 -R1292 -0.0642486972510268 A1287 -P1294 -0.0645234411903515 A1286 -P1294 -0.0666367385795685 S1289 -A1296 -0.0666559405760507 A1303 -E1310 -0.068058771737422 E1280 -A1286 -0.0681508084340579 A1287 -A1299 -0.0691344738809498 A1303 -A1311 -0.0693942268233285 S1313 -S1320 -0.0726133457683218 D1316 -L1322 -0.0755155606392632 E1310 -A1319 -0.0797422523163216 A1299 -V1306 -0.0823581431342522 V1291 -E1298 -0.082622935091706 E1309 -D1316 -0.0847887882698244 A1304 -A1312 -0.0849427466416319 L1290 -E1298 -0.0912875769832662 S1313 -V1321 -0.0929992132946009 R1292 -A1301 -0.0985928097417208 A1299 -V1305 -0.0989216450598671 A1304 -E1310 -0.0993391692232852 F1278 -A1285 -0.100169791775317 A1301 -M1308 -0.10319614371649 L1290 -A1303 -0.103317080284976 D1284 -S1289 -0.104272221527264 L1290 -T1295 -0.105084918813677 A1301 -S1313 -0.10547344278246 S1313 -A1318 -0.106031068507657 T1295 -A1301 -0.106588184185162 A1314 -A1319 -0.106614375847526 S1289 -V1302 -0.107549477600739 P1294 -V1306 -0.109887762830416 P1307 -A1312 -0.113414609936752 E1310 -D1316 -0.116728108186266 A1279 -L1290 -0.11722636677205 M1308 -S1313 -0.122392740913419 L1290 -A1300 -0.124404548113843 G1315 -S1320 -0.127197459049142 Q1288 -P1294 -0.130827952031837 V1306 -G1315 -0.132587882759393 P1294 -A1299 -0.133196325925891 F1278 -L1283 -0.1335641716897 Q1288 -S1293 -0.136870983516629 V1305 -G1315 -0.136905732282615 V1305 -A1311 -0.138385985528201 D1284 -A1299 -0.138752116159331 A1279 -D1284 -0.139232600270028 A1301 -P1307 -0.141312363060894 A1300 -P1307 -0.144338390147031 P1294 -A1304 -0.14505911511921 T1295 -A1304 -0.145248119443183 V1306 -F1317 -0.148298125436558 A1279 -Q1288 -0.149422627243002 A1285 -E1298 -0.150156679423764 L1290 -A1301 -0.150158645486192 F1317 -S1325 -0.156593543698628 V1291 -A1297 -0.156800073150651 L1282 -A1287 -0.157141915013254 L1283 -A1296 -0.157465661949248 F1317 -V1323 -0.157807868189329 A1285 -S1293 -0.160628767681828 A1297 -V1306 -0.161512521084957 E1280 -A1287 -0.161940012812003 R1292 -V1302 -0.163352258977702 T1295 -V1306 -0.1647370895028 D1284 -A1296 -0.171162060827938 A1297 -P1307 -0.171816353878835 A1296 -A1304 -0.172067785354758 S1293 -V1305 -0.174535808967622 D1316 -V1321 -0.176565998399891 P1294 -A1300 -0.178803269192307 A1279 -A1286 -0.180797716496314 L1290 -A1296 -0.183020691704213 A1287 -R1292 -0.185579338241572 M1308 -A1314 -0.186043922704648 Q1288 -T1295 -0.193361560343666 S1293 -A1304 -0.196747570558641 A1303 -E1309 -0.199459639875313 A1319 -S1325 -0.200594062396066 A1314 -S1320 -0.202115916306721 A1318 -S1325 -0.202554748278852 P1307 -S1313 -0.203462576152227 R1292 -V1306 -0.204296011441174 A1300 -M1308 -0.206384893099208 V1302 -E1309 -0.215229282581146 S1293 -A1303 -0.218622744404464 S1289 -T1295 -0.219531461983814 L1290 -V1302 -0.232183492907324 F1317 -L1324 -0.236526624526871 T1295 -V1305 -0.238466294294743 D1284 -E1298 -0.24000808552894 R1292 -A1303 -0.247100781415997 V1306 -A1311 -0.247123956978891 A1279 -A1285 -0.249591697347891 V1305 -S1313 -0.250493651240957 E1298 -P1307 -0.259533455925386 A1319 -L1324 -0.266730478506354 A1303 -M1308 -0.294111043195622 S1293 -A1300 -0.303339138168675 V1306 -S1313 -0.304765803291302 A1297 -V1305 -0.320408860935085 P1294 -E1309 -0.321864988815201 V1291 -V1302 -0.352331293192889 V1291 -A1301 -0.353724241736878 A1286 -V1291 -0.361242508989172 V1291 -A1300 -0.367590078933354 A1285 -V1291 -0.410975934542289 V1306 -A1312 -0.448255310359149 A1300 -V1306 -0.467060335106245