[Mon Aug 29 17:09:46 2016] >Input file: TMQ4RS76S1G.pdb >TM segments: 420-451_ 540-560 MAIDEN score = -2.3671 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L551 -I557 1.07053190926298 L551 -K556 0.672087880300579 T545 -H550 0.56520745983454 M439 -N446 0.538072553245034 I429 -R541 0.38937102896975 T545 -L551 0.345572236776686 K547 -R553 0.318875071750546 L548 -R553 0.311919789747928 P440 -N446 0.299546894687485 V543 -D555 0.285285392510687 I438 -N446 0.258838933813703 S546 -L551 0.234138284814243 T545 -L560 0.206354636545601 T540 -I557 0.204575827381769 P440 -D445 0.194996512960531 S430 -S436 0.190246407366425 V544 -L558 0.18997782789861 K547 -L559 0.183399631166507 I542 -H550 0.182922056738609 W437 -N446 0.18199552813884 M439 -I447 0.18137627447047 M439 -D445 0.176115750744405 R541 -K556 0.173420266035865 H425 -F431 0.171678999782858 S430 -L448 0.171298067726467 E549 -K556 0.169932974723103 K424 -T540 0.167821164783418 S432 -M439 0.164315779817437 G441 -G450 0.16174188442765 G441 -N446 0.160130048915214 S432 -F449 0.157599247702498 K552 -L558 0.155880254685322 H550 -D555 0.150423820132567 E549 -A554 0.147592090000792 M439 -G450 0.147568945981583 V543 -R553 0.146731467513654 L548 -K556 0.142317206825727 K552 -I557 0.134171083237753 R541 -D555 0.133854742585608 G427 -R541 0.132862606402831 T545 -K556 0.118636001347131 P433 -T545 0.116492671025657 V543 -I557 0.115907962638595 K547 -D555 0.11574146912438 S546 -L558 0.115475460603411 S430 -V543 0.10723759846443 R444 -F449 0.105736028116519 L551 -L560 0.104120119735061 E549 -D555 0.104108457862086 S546 -L560 0.103913049065842 F431 -W437 0.103861184749269 S432 -T545 0.103316761348916 P440 -L448 0.103015135638787 T545 -R553 0.101179405340777 I542 -I557 0.100392082651819 N435 -N446 0.100311553931581 V543 -L551 0.0993885378922066 I542 -A554 0.0979387277037187 T540 -A554 0.097335818230976 R444 -G450 0.0941285397838647 P433 -R541 0.0924236232561069 T442 -G450 0.0905751814077407 V543 -L560 0.0895752228534401 K547 -L558 0.0881017939111124 R541 -L551 0.0851983604202435 R553 -L558 0.0846395858911015 S430 -G450 0.0812669302280291 R428 -L451 0.0810370787403225 S432 -T540 0.0800612844631555 I443 -L451 0.0797100159691908 I423 -I542 0.0781739763965799 S432 -R541 0.0753436347599127 W437 -D445 0.0752917619774609 S426 -T540 0.0743263928156246 V543 -K552 0.0733527489451467 I429 -L451 0.0730955605608514 I542 -L560 0.066606074729791 H425 -S430 0.0658300625029744 N435 -V544 0.0654754715159274 S436 -I443 0.0640983909621959 F431 -T545 0.0637482229890223 S430 -N446 0.0632075286598539 F431 -L451 0.0624841345768372 S432 -N446 0.0588585846933268 V544 -A554 0.0587132348430375 A554 -L559 0.0546826298220378 P440 -I447 0.0543271422389571 S546 -I557 0.0538171955314092 V544 -R553 0.0513366560857396 R428 -T540 0.0512442770399497 S546 -A554 0.0504404737906388 W437 -L448 0.04942114765685 S430 -L451 0.0488126975930594 S430 -N435 0.0464240041408228 T545 -K552 0.0429432055262211 H550 -L558 0.042520043393779 D445 -L451 0.0423582404284009 I438 -I447 0.0394498257528326 F431 -I447 0.0385561718621492 V544 -D555 0.0363775918562164 P433 -I438 0.0361056265017525 G427 -T540 0.0359407868775941 V544 -K556 0.0347420449091689 W437 -I443 0.0315717079814251 S546 -K556 0.0293020987394685 Q434 -V543 0.0291780826234191 T540 -K556 0.0291543177587839 L551 -L558 0.0278337529978714 H425 -I542 0.0271136005460841 V543 -E549 0.0269146855896094 I542 -R553 0.0257892398783661 R541 -L558 0.0233913334134375 W437 -T442 0.0220436101177235 S436 -N446 0.0216811736003049 L548 -L558 0.0216507181346 Q434 -I542 0.0214814887369936 V544 -E549 0.0198803294949375 H550 -L559 0.0189129852477548 P433 -I542 0.00955612498585268 F431 -V544 0.00736986335955869 K424 -I542 0.00703510216657177 T540 -L558 0.00501022518959482 I443 -G450 0.00338903363059417 P433 -M439 0.00270698880305709 M439 -R444 0.00130566533081833 I542 -K556 0.000691302040394248 I429 -I542 0.000621388217871832 F431 -T540 -0.00253504032039031 K547 -I557 -0.00447350136082791 I542 -D555 -0.00876564352574016 S426 -F431 -0.012300888948571 V543 -H550 -0.0133276718399082 S432 -I438 -0.0139104328263211 S436 -I447 -0.0144476612898287 S546 -K552 -0.016746060731444 Q434 -S546 -0.0170410925224432 K552 -L559 -0.01742181195248 I429 -V543 -0.0188505964470425 G441 -L451 -0.0188511622445731 S432 -I447 -0.021583156772441 M439 -L448 -0.0218505758901451 I438 -R444 -0.0221802171517519 D445 -G450 -0.0222970102733315 W437 -F449 -0.0243104097728724 R541 -I557 -0.0326711415470337 H425 -T540 -0.0327600162059078 S436 -V544 -0.0351020158520479 T545 -D555 -0.0372143015799518 V544 -K552 -0.0385427516798629 T540 -R553 -0.0392109102977194 R444 -L451 -0.0399048349769151 S432 -W437 -0.0454414697086951 P440 -F449 -0.0460855110648065 I542 -L551 -0.0478011152918199 S426 -I542 -0.0500715037560191 S430 -F449 -0.0528671905816196 L548 -D555 -0.055479725011784 N435 -T545 -0.0559595534816548 P440 -G450 -0.056074572934411 V543 -L548 -0.0609235324030308 I542 -K552 -0.061832874693768 T442 -L451 -0.0621628164236641 S546 -R553 -0.0664749503745785 I423 -I429 -0.0745609170297374 K424 -I429 -0.0791829242496842 S436 -F449 -0.0799005942374379 V543 -A554 -0.0801228118984145 S426 -R541 -0.0804216108529712 V544 -H550 -0.0835218228746344 R541 -R553 -0.0851286936490471 G441 -L448 -0.0873648637009428 F431 -I438 -0.08807945976731 P433 -I447 -0.0885329933043497 K547 -K556 -0.0900907002032918 S430 -I447 -0.0902277606338706 H425 -R541 -0.0902624414916089 R428 -R541 -0.0924095556079819 S430 -R541 -0.0934254106080668 M439 -L451 -0.0965746221524035 I443 -F449 -0.100004948377354 I438 -D445 -0.100377462486534 I429 -F449 -0.1031107847919 S430 -V544 -0.104847096639797 S430 -W437 -0.105598154215183 F431 -L448 -0.105752998170124 I438 -L448 -0.107293882961302 N435 -V543 -0.108637922765619 G427 -I542 -0.109774680432198 I438 -G450 -0.110106289580024 E549 -L559 -0.110291003518436 I542 -K547 -0.113063804885697 E549 -I557 -0.113319184338544 S432 -V543 -0.113907760873968 K547 -L560 -0.123505820010516 P433 -V544 -0.134004279238627 R541 -H550 -0.135901855804934 Q434 -V544 -0.140080909561447 I542 -L559 -0.146863661625101 F431 -F449 -0.14765454774293 P433 -N446 -0.150583320671768 S432 -I542 -0.150981891903821 S430 -I542 -0.152355628432868 R428 -I542 -0.155388491802665 E549 -L558 -0.159947549559537 V543 -L559 -0.161002446566447 T545 -A554 -0.162853839752994 G441 -F449 -0.163325744634598 I438 -I443 -0.165340217774965 P433 -V543 -0.167646594692184 S430 -T540 -0.171038263203143 M439 -F449 -0.172955231552008 S432 -L448 -0.178500027393383 N446 -L451 -0.181388450828252 W437 -R444 -0.185157046878789 F431 -S436 -0.185806262364164 G441 -I447 -0.190475613032394 L548 -L559 -0.196476004855758 S546 -L559 -0.196818556129536 K424 -R541 -0.199969306827533 F431 -I542 -0.203686765626262 L551 -L559 -0.20934421406448 R541 -A554 -0.210913706924233 T442 -I447 -0.213337440379261 T540 -D555 -0.214239431296063 I438 -F449 -0.215347729095939 Q434 -T545 -0.219863223637263 L548 -I557 -0.221052776612566 R541 -K552 -0.22535902334802 V543 -K556 -0.229097455331618 F431 -N446 -0.229280543370324 F431 -R541 -0.2334386285755 I443 -L448 -0.237600033941273 F431 -V543 -0.2546900065741 S432 -V544 -0.25761579777939 W437 -I447 -0.262535463166383 T545 -L559 -0.26497187803243 T545 -L558 -0.276402111432058 H550 -I557 -0.276440500811559 V544 -L559 -0.279619888801943 V544 -L560 -0.283831610861448 I542 -L558 -0.284159987893934 H550 -K556 -0.294277190430189 L548 -A554 -0.296997168836256 T442 -F449 -0.306412072728945 T442 -L448 -0.307163102354595 T545 -I557 -0.313209059353406 K547 -A554 -0.34537549713283 V543 -L558 -0.362991871404792 K547 -K552 -0.389835550034151 I429 -T540 -0.40006386208709 V544 -L551 -0.410070620782557 V544 -I557 -0.46179980491668