[Mon Aug 29 17:13:00 2016] >Input file: TMQ504C1M16G.pdb >TM segments: 263-275_ 305-315_ 320-327_ 330-339 MAIDEN score = 54.4725 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A326 -N332 10 T270 -Q308 10 C271 -Q308 10 N266 -P312 10 C324 -V335 4.85424069288263 T323 -I336 1.56157996728549 T268 -V310 1.5387615311087 L321 -S338 1.23811009690912 L321 -I336 1.18221738814553 V267 -I311 1.15609932726159 L321 -I337 1.10227375835742 C324 -S334 1.0789614580045 L263 -L314 1.05993504927679 C271 -S307 1.03915302647214 L269 -L309 0.98167993218563 T323 -V335 0.779152549083836 S274 -I305 0.757449763275683 C271 -L309 0.750230204060814 V267 -L314 0.727351937823103 C324 -I336 0.698051455293082 T270 -L309 0.662858838123816 L269 -V310 0.614482103959473 L263 -H315 0.611978919649465 L321 -V339 0.592425071942245 Y322 -I336 0.574071496715135 Y322 -V339 0.570024621748241 Y322 -V335 0.566845690072554 V267 -V310 0.559891942740355 I325 -V335 0.559574199304587 L263 -S313 0.556229821909504 V267 -S313 0.474904057338297 L269 -I311 0.454460039388142 T268 -Q308 0.437950850932904 C271 -V335 0.415292860119863 S272 -I305 0.374340281303521 A273 -I305 0.372126095713706 G265 -P312 0.359243531319657 T268 -I311 0.336445001810651 A273 -S307 0.324593916107587 C324 -S333 0.321983529292289 A273 -S306 0.313619516630379 L269 -I337 0.31026896436896 V310 -C324 0.30512618244379 G264 -P312 0.294154645515794 T270 -S307 0.292989991017166 A275 -S306 0.290721754636618 C271 -N327 0.267812916566336 L269 -S338 0.263701731853305 S274 -N327 0.263281712528807 C271 -V339 0.25494843269539 A326 -S334 0.247036746107252 C324 -V339 0.241432619288739 L309 -T323 0.226632807013381 T270 -S306 0.223601714860013 L269 -Y322 0.221938564155182 S274 -G331 0.220788123455535 N266 -V310 0.212319115605379 Y322 -I337 0.209975416220365 I325 -G331 0.194093788687062 I311 -T323 0.189979123708759 V267 -S338 0.189427300207097 T268 -I336 0.180589827304845 A273 -G331 0.179457783191589 T268 -T323 0.176932447738101 S274 -A326 0.175745389433788 S307 -C324 0.175625919768218 T268 -L309 0.167845513622492 Y322 -S333 0.167517641929436 T323 -N332 0.163803155252297 I325 -S334 0.159173563434818 A273 -T323 0.157518607873171 C271 -S306 0.150870499615272 S306 -S334 0.145661837412518 S272 -V335 0.145357225261264 I311 -I337 0.142710136473177 T270 -S338 0.141340498188061 S274 -C324 0.137953958560651 S313 -V339 0.136275971324802 N266 -S338 0.133938597311717 I305 -C324 0.13005775100844 L309 -L321 0.126223775672757 L269 -S313 0.122284606399703 S306 -I325 0.122072153297379 L309 -L314 0.120578067541249 L263 -V339 0.120444594576398 G264 -V339 0.113981730312081 Q308 -S333 0.110028516622714 L269 -L314 0.109688124831897 T323 -I337 0.107763152170509 I305 -I325 0.106957991880025 A275 -C324 0.104808610550072 I305 -G331 0.104008711564492 Q308 -S338 0.103611113267263 V267 -L321 0.102665514590338 L314 -V339 0.102145310184982 G320 -V335 0.100102501076704 S272 -Q308 0.0998425383767856 A275 -S307 0.0951688323001139 L321 -S334 0.0942289999175177 S306 -N327 0.0938805416512407 L314 -I337 0.0938017842234385 A275 -V335 0.0936579420679622 T268 -S338 0.0932660141613102 L269 -G320 0.0928365987160884 L314 -L321 0.0882303273922029 L314 -G320 0.0856821912063914 A275 -N332 0.084676123775814 N266 -L314 0.0834424919012609 T270 -S333 0.0828011117349547 T270 -S334 0.0823597389842918 S306 -T323 0.0781414188944189 V267 -T323 0.0777572250866552 S272 -G331 0.0772825738999543 S307 -Y322 0.0764789885533519 S306 -A326 0.0764196907580141 Q308 -Y322 0.0753832276795007 L314 -Y322 0.0720310553743637 A273 -L330 0.0716875551519749 S274 -V335 0.071397476874548 T270 -V310 0.0678895903343015 V267 -I336 0.067833569569828 L314 -S338 0.0676455407963026 S272 -V310 0.064737817083663 V267 -P312 0.0643675294271726 C324 -S338 0.064129528330612 N266 -V339 0.0640845350200021 S307 -S333 0.0628292164405635 N266 -G320 0.0610657169822546 A273 -L309 0.0607226055534087 S274 -I325 0.0605050951190136 S307 -S334 0.0594671970876925 P312 -Y322 0.0578880042211611 H315 -S338 0.0575431954886156 I311 -S338 0.0570611651479287 S272 -A326 0.0560761310179165 A273 -I336 0.053311441420548 S272 -N327 0.0522495523062343 T268 -P312 0.0501622834322228 T270 -G320 0.0496842321320954 T270 -V339 0.0449583124033808 A275 -A326 0.0429380787888753 S274 -N332 0.0423705092919615 L309 -V339 0.0419325759600815 S272 -N332 0.0419073736303979 S307 -N327 0.0405711983147943 I325 -N332 0.0403392914262284 L269 -I325 0.0399006410363496 S306 -V335 0.0354274056628746 V310 -I336 0.0345518964930136 Q308 -I337 0.0329160787423719 L269 -Q308 0.0278441988465037 H315 -Y322 0.0246202661267543 I305 -A326 0.0244477977499695 L263 -G320 0.0216019084288641 L269 -I305 0.0209137522902569 V310 -I337 0.0171814089674664 H315 -G320 0.0166682429126581 C271 -L321 0.0135521292622907 S307 -A326 0.0129168880335628 L309 -I336 0.010658341771693 P312 -V339 0.010222765510948 N327 -V335 0.00844286165414498 L269 -V339 0.00839923187577085 S274 -S334 0.00820640362405034 G264 -V310 0.00656343161519413 Q308 -V339 0.00646567846321355 L309 -V335 0.00431616480714681 V310 -T323 0.00332411450188164 L263 -T268 0.000714752428543797 S306 -S333 0.000608177347734162 S274 -Q308 0.000132995326660001 S274 -L330 -0.000860061104755703 L309 -G320 -0.00111982371900576 L269 -H315 -0.00126866084714949 V267 -I337 -0.00241699672715256 T270 -P312 -0.00616640576507876 I311 -G320 -0.00628698589708576 C271 -S338 -0.00698795662992024 L309 -S334 -0.00868748558391874 A275 -S333 -0.00884564105716379 A273 -N332 -0.00976497430919565 C271 -I311 -0.0110329292466358 T270 -I325 -0.0115416807087403 V310 -Y322 -0.0120028045599074 S307 -I337 -0.01337530777458 I311 -L321 -0.013767169255213 Q308 -I336 -0.0138015377358953 T268 -C324 -0.0138519249227125 S306 -C324 -0.0154913391855622 A275 -I325 -0.0160322346982968 Q308 -S334 -0.0180850413578427 S274 -S307 -0.0182475317097803 S313 -G320 -0.0187680986968854 T268 -L321 -0.0217495126650169 S272 -I336 -0.0237689793227758 I325 -I336 -0.0242389084861898 I311 -C324 -0.0244845282339483 N266 -Q308 -0.0251008504311532 C324 -G331 -0.025397542386238 S307 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