[Mon Aug 29 16:43:41 2016] >Input file: TMQ5UEL7M1G.pdb >TM segments: 27-35 MAIDEN score = -0.0599 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P29 -T34 0.151363296268049 S28 -T34 0.0856458032890411 K27 -T34 0.0426996485342168 E30 -V35 0.0276460717794981 P29 -V35 -0.00131372759600445 S28 -K33 -0.0615453608099981 K27 -K33 -0.0790024986212057 K27 -V32 -0.225374309986212