[Fri Aug 26 16:36:08 2016] >Input file: TMQ5YJI0M7D.pdb >TM segments: 59-88_ 90-97 MAIDEN score = 26.6533 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- R65 -V83 10 S63 -Q84 10 D71 -L76 1.23030381702399 Q69 -I78 1.06634082932731 W68 -L80 1.00875942715725 L64 -K82 1.00369718347958 W68 -L79 0.990070806267492 I66 -V83 0.987713943683778 L79 -E90 0.966990233202863 E59 -L64 0.957334295909583 L64 -V83 0.927886270323473 Y67 -I78 0.839146278087897 W86 -I94 0.809160245843181 L64 -Q84 0.667325618770995 L61 -Q84 0.633335300945841 Y67 -L79 0.608587868596922 S87 -R92 0.581127329579187 W68 -I78 0.554494817440448 Y67 -L80 0.517413500432727 L79 -R92 0.482031732303449 Q69 -K82 0.454883390268684 Q69 -L80 0.426361268259598 L64 -D96 0.425491020722795 K82 -N91 0.414727217146992 L80 -N91 0.384413494183372 L80 -E90 0.375778060870402 R65 -I94 0.350196650579941 K82 -E88 0.348838882393024 D71 -A77 0.34488582030759 S72 -A77 0.341315142469743 S87 -T93 0.326659141251149 K82 -I94 0.324059809293393 S63 -V85 0.276457190286655 G81 -E90 0.272666651011015 K70 -V75 0.266605809693328 R65 -G81 0.266041068216006 L80 -E88 0.263473474217946 L79 -T93 0.24027049822903 K70 -R92 0.233828252826778 Q69 -E90 0.23081453589968 W68 -T93 0.213195031479721 L80 -S87 0.207038816674398 V85 -R92 0.200451969376089 L64 -T95 0.198492922752925 G81 -R92 0.191338754738813 E60 -K82 0.18003779295933 Y67 -V85 0.173396845917962 Q69 -M74 0.172674477295915 Y67 -S87 0.166331137577368 A77 -E90 0.164006174003015 W68 -W86 0.159721864613556 K82 -E90 0.158720348050377 Q84 -D96 0.15817111643512 V83 -I94 0.149308581507289 L79 -W86 0.128390274067872 L64 -L80 0.125278980600699 K70 -L80 0.120714714649706 D71 -I78 0.118046040152299 I66 -D96 0.113839296937657 W68 -K82 0.11279528967413 R65 -W86 0.110143881083605 S63 -G81 0.10961889021918 E59 -I66 0.109244012264925 R65 -K82 0.106292618776864 I66 -W86 0.103400215071954 Y67 -D96 0.10083196720811 K70 -G81 0.0990962723823011 R65 -T95 0.0959863573992195 V83 -T93 0.0958102639020506 Q69 -L76 0.090691253415855 G81 -T95 0.0891066737783148 E60 -R65 0.0851064804029864 S87 -I94 0.0818396609885204 E60 -V85 0.0800823852782986 S63 -S87 0.0780797226206928 R65 -L79 0.074556889234621 E88 -T93 0.0744963952912583 W68 -V75 0.0737087058655497 R65 -V85 0.0733443633409756 L79 -S87 0.0733048897835338 L61 -V85 0.0686063909303387 L79 -E88 0.0669779608711023 L80 -I94 0.0667923537348239 R65 -T93 0.0643304687986254 V85 -N91 0.0638684084145078 Y67 -Q84 0.0601196816041099 Y67 -N91 0.0598141617515525 Q84 -R92 0.058443199679997 R65 -I97 0.0571661347016246 V83 -R92 0.056833059139658 L80 -T93 0.0545727010043873 W68 -E88 0.0519222018767124 L79 -N91 0.0490543811628723 L64 -W86 0.0420214547791868 Q69 -T93 0.0384768078466006 D71 -L80 0.0340008342915059 I78 -N91 0.0331860958076158 G81 -N91 0.0330883465575629 S87 -D96 0.028411178304196 I78 -E88 0.0277421849941688 E59 -V83 0.0257012480320433 W86 -N91 0.0201216730627103 S63 -T93 0.0180170570833322 S87 -T95 0.0178802597895933 V83 -E88 0.0175453463828385 V83 -I97 0.0164142357204843 I78 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-0.163972036718159 K70 -E90 -0.166802846602919 L64 -S87 -0.166910502549801 E88 -T95 -0.168250128726682 K73 -L79 -0.168651118264554 E60 -I97 -0.169327680756234 S63 -K82 -0.169659550595416 W86 -I97 -0.170355045812304 K82 -D96 -0.17192879395479 S63 -V83 -0.172444601939619 Q84 -I97 -0.173393851961595 E59 -I97 -0.175474077907098 S72 -L80 -0.178234306366009 Q84 -T93 -0.178767789207179 I78 -E90 -0.18101770738955 L64 -G81 -0.181591553462079 W68 -E90 -0.186159321808354 I66 -K82 -0.186832173198797 G81 -E88 -0.187817996819365 A77 -R92 -0.188388139345226 V85 -T93 -0.191859923619458 E88 -I94 -0.193827771871236 K82 -T95 -0.205301226478723 Y67 -I94 -0.205735902351814 R65 -D96 -0.207900044714022 E60 -T95 -0.211987210138621 L61 -K82 -0.213540421734445 V85 -T95 -0.216854236891875 I66 -R92 -0.218775516884139 I66 -I97 -0.219756250339548 G81 -T93 -0.220388933762196 I66 -Q84 -0.22583529963573 A62 -Q84 -0.227074521129733 R65 -L80 -0.227902070607567 I78 -R92 -0.228817826435656 G81 -I94 -0.238500185472151 G81 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