[Mon Aug 29 16:50:55 2016] >Input file: TMQ5ZRC4M1G.pdb >TM segments: 183-197_ 233-258 MAIDEN score = 1.1414 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L250 -V255 1.31155402054382 A237 -K242 1.00156062836143 A186 -V238 0.733040804882638 N247 -I258 0.720341480608391 M183 -I244 0.690416806740113 M183 -A249 0.682491819610188 A186 -K242 0.641531289002124 M183 -A246 0.640610949951781 S187 -V238 0.512564831830488 K236 -K242 0.483192534042149 A249 -V254 0.477247948038059 L250 -I258 0.454770097181614 M183 -K242 0.438280098280068 L250 -Y257 0.411813748544152 A185 -S243 0.34756054982492 A185 -S190 0.320685078195353 M183 -S243 0.314505837812417 A234 -G253 0.308506893850612 I244 -K252 0.303324873149379 F233 -E240 0.298034276803532 S190 -G241 0.295158951629481 P188 -E235 0.293104854757738 A246 -V255 0.283907179580453 E235 -G241 0.264255780388345 A246 -I258 0.258567589209669 P188 -T193 0.236797212801627 E248 -V254 0.220645551556489 P188 -T239 0.21075373758872 A185 -G241 0.199341553446791 P188 -E240 0.197660611839268 G184 -N247 0.182286519643195 S243 -L250 0.17150080241438 G184 -E248 0.170499267423722 A185 -V255 0.165257909641011 A237 -I244 0.162537033453283 A186 -A237 0.16217127945543 A237 -V254 0.162103436104728 G184 -K252 0.157002773437653 M183 -Y257 0.156890366559191 I244 -I258 0.15517045913106 F233 -K242 0.153272448333512 A185 -E248 0.152701185268045 V238 -V254 0.148048822197085 I244 -V254 0.145893882870911 A234 -G241 0.144654651539311 M183 -N256 0.136146919890995 S187 -E235 0.130084482447164 V238 -K252 0.128568571581373 A234 -I244 0.126373826253329 K236 -S243 0.125034598861818 M183 -T245 0.123079159456704 P188 -A234 0.122727614508849 G184 -G241 0.122507885236001 P188 -G241 0.121558387537606 P188 -A237 0.12145041862459 A186 -E240 0.119270328334412 E248 -N256 0.118712563899654 E248 -V255 0.116311379799065 A185 -V238 0.115463169221384 G184 -L250 0.112612386549569 S187 -T193 0.11251963819175 S243 -V254 0.110623531793061 A237 -S251 0.107518145242438 A185 -G253 0.10647256864511 A234 -S243 0.105255085052587 I244 -Y257 0.104391379108983 G184 -G253 0.101479694201575 A185 -E240 0.0998000899423221 T245 -G253 0.0984698349330415 A185 -S251 0.0982424693214976 K242 -V254 0.0962382333674068 S187 -F233 0.0935883204389309 N247 -Y257 0.0928549955940197 G184 -T239 0.092185051988537 I244 -A249 0.0879938889957712 K252 -I258 0.0853024067027301 A185 -A246 0.0824996643374925 S190 -V238 0.0790590940429059 A185 -I244 0.0785138905649365 G184 -S251 0.0758557771404658 M183 -V238 0.075356576300095 G184 -I244 0.0685752308465446 S243 -G253 0.0680555414701685 A186 -E235 0.0631729883029726 G241 -A249 0.062594264639642 N247 -K252 0.0617797324793807 I244 -G253 0.0590040018055742 V189 -A237 0.0573497442702724 G184 -A234 0.0566576354416748 N247 -N256 0.0517622350630521 A234 -A249 0.0505665320475774 A234 -V254 0.0497494009351107 A237 -A249 0.0488861978598984 A186 -I244 0.0487490200832912 S187 -G192 0.0472790684016875 V238 -G253 0.0464249230171658 S187 -G194 0.0420930779700185 S187 -G241 0.0407390656341549 P188 -F195 0.0407300607170691 K236 -G241 0.039867806242931 T245 -N256 0.0388842552029693 E235 -K252 0.0385719854188689 G184 -S190 0.0375621665673083 L250 -N256 0.0339936947691006 A237 -T245 0.0310713001834045 I244 -L250 0.029109457629676 A186 -T193 0.0274602060333018 M183 -I258 0.0261287305969997 A185 -A237 0.0246261574456925 T239 -I244 0.0242593082002287 A186 -T245 0.023407825737372 G253 -I258 0.0227465085531415 A186 -L191 0.0185045708589113 A186 -G192 0.0157870240568585 S187 -S243 0.0135545855689843 V189 -G194 0.0107171048107944 G184 -F233 0.00999908764674196 A246 -K252 0.00953794379574752 F233 -V254 0.00570604136449937 S243 -S251 0.00336300459772243 S190 -K242 0.00224452016523369 A237 -G253 0.0014230065203531 A185 -T245 0.00130989915084889 G241 -E248 0.000325350583715078 S190 -F195 -4.54348572347385e-05 G184 -E235 -0.00286510841616661 M183 -A237 -0.00886096747533971 F233 -E248 -0.0119573965316357 K242 -S251 -0.0139114231032429 E235 -S243 -0.0149771904794991 S243 -K252 -0.0153468172948128 F233 -S251 -0.0179172979882471 A186 -V254 -0.0185198555949206 S251 -Y257 -0.0187245758008743 F233 -S243 -0.0191591712487708 A186 -S243 -0.0201209005433132 V189 -S196 -0.0218242067304263 A249 -V255 -0.0228423383466305 M183 -G253 -0.0276064140321037 A234 -V255 -0.0296085699935409 F233 -G253 -0.0297003472751127 S187 -E240 -0.0301450202422924 P188 -G194 -0.0306761647185128 M183 -A234 -0.0307397967304635 A234 -E248 -0.0308103034884768 S190 -T239 -0.0318582935485163 L191 -G241 -0.0359204615172767 V189 -G241 -0.0395181161951506 A237 -E248 -0.0399761768736936 V238 -A249 -0.0426880919775372 A246 -G253 -0.0428344950961472 V189 -E235 -0.044407082145006 G184 -K236 -0.0470356950855351 G184 -V189 -0.0476480438924201 M183 -E248 -0.0491166636403451 A246 -N256 -0.0521738213941878 K236 -K252 -0.0540624976984105 S187 -K236 -0.0552776230790245 S187 -K242 -0.0556929191073635 V189 -K236 -0.0573520572746089 S190 -E240 -0.0593108779358302 A186 -T239 -0.0624696710163901 G184 -A246 -0.0625318395373933 V189 -F195 -0.0632003754302124 A249 -I258 -0.0643420096942986 A186 -F233 -0.0650417959720917 A185 -F233 -0.0678650848362299 K242 -L250 -0.0689871130387161 K236 -I244 -0.0710202210076361 S243 -A249 -0.0744260239001822 N247 -G253 -0.0755785851425568 A234 -S251 -0.0770875971467238 A186 -A249 -0.0776759644692097 E248 -Y257 -0.0792085789135974 G184 -V238 -0.0809461631852679 G184 -A237 -0.0809717789711497 N247 -V255 -0.081775080072195 S187 -T239 -0.082567164199851 A246 -V254 -0.083878403682188 A186 -K236 -0.0943533829988095 F233 -I244 -0.0961175170044704 S243 -V255 -0.102856549649206 A234 -K252 -0.104243407058788 V238 -I244 -0.104370812808426 M183 -N247 -0.108751331393349 A185 -K252 -0.113454861559491 E235 -E240 -0.115802156258899 F233 -G241 -0.11778909259966 G184 -V254 -0.118949459002237 A185 -T239 -0.119570120832548 T245 -Y257 -0.120825674041673 E235 -V254 -0.123082139239146 P188 -K236 -0.124481027665692 M183 -G241 -0.126882246912456 S243 -E248 -0.131395588912204 A185 -L250 -0.133260749936874 K242 -G253 -0.133689952828422 I244 -N256 -0.13427224786175 K252 -Y257 -0.1346137171384 A185 -A249 -0.137937306280991 F233 -V238 -0.139018083628567 P188 -K242 -0.13932607488171 V189 -T239 -0.140819226098168 S251 -I258 -0.141068031578865 G184 -V255 -0.141470627144209 A185 -L191 -0.144197699812176 I244 -V255 -0.148520745185526 K242 -N247 -0.154364518093258 M183 -E240 -0.155336379180005 A234 -T239 -0.158666852679107 F233 -A249 -0.160931539155662 L191 -E240 -0.162582271770549 G184 -A249 -0.162662969091329 A186 -K252 -0.162702404055496 M183 -S251 -0.168713586736238 M183 -K252 -0.171376340642684 S251 -N256 -0.174201107602104 V189 -K242 -0.17562071109431 A185 -A234 -0.192526238736461 E248 -I258 -0.194238337899918 K242 -K252 -0.198279566354577 G184 -E240 -0.200881511964763 A237 -S243 -0.202257939414306 A186 -G241 -0.202727553753325 K242 -E248 -0.207362028325961 A234 -E240 -0.216782715299619 E235 -K242 -0.217365595229802 F233 -T239 -0.21851513210101 T245 -I258 -0.227090501665224 A249 -N256 -0.227582794489601 S187 -A234 -0.227762568623085 P188 -V238 -0.230691118918154 F233 -K252 -0.233051578602356 T245 -S251 -0.239855300821777 A186 -A234 -0.241553155116729 V238 -S243 -0.250151142089044 T245 -V255 -0.253072486118258 A185 -K236 -0.25538838240673 E248 -G253 -0.258424636443955 T245 -K252 -0.262407343395115 A237 -K252 -0.263768436446747 T245 -V254 -0.269151480805877 A185 -E235 -0.27042539264246 V189 -E240 -0.27410183365492 M183 -L250 -0.289784962293437 S187 -A237 -0.295309295672295 A246 -Y257 -0.296362311763165 M183 -V255 -0.297385309288999 V189 -V238 -0.298235613168575 I244 -S251 -0.298830142947288 K242 -A249 -0.300037063841895 N247 -V254 -0.301222709075305 T245 -L250 -0.318639321072929 G184 -T245 -0.33143908110544 G184 -K242 -0.33252681757965 M183 -V254 -0.333778671951184 A249 -Y257 -0.335471048749633 A185 -V254 -0.336902474151565 A234 -K242 -0.354583043767167 A185 -K242 -0.37876798320251 A246 -S251 -0.476100318770376 G184 -S243 -0.679372808882193