[Fri Aug 26 16:44:58 2016] >Input file: TMQ61476S2D.pdb >TM segments: A219-234 MAIDEN score = -0.3292 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- F229A-P234A 0.0482649888916931 I228A-P233A -0.110688955220289 E227A-D232A -0.266765663535612