[Mon Aug 29 16:55:14 2016] >Input file: TMQ63KA2M1G.pdb >TM segments: 636-673 MAIDEN score = 6.4576 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P647 -P672 2.84703085027031 I649 -M673 1.5475802544288 V648 -M673 1.2524377490998 A645 -R670 1.0544111402911 A646 -P672 1.01000050439508 P641 -A646 1.00097079709828 V648 -R671 0.895703634400216 R640 -V648 0.768111957528153 A645 -P672 0.735258631741647 L650 -L660 0.717630923059034 I664 -M673 0.498674835558073 R640 -F663 0.479954147580244 H642 -N667 0.444677657297877 P641 -P647 0.432996262933075 L660 -R665 0.419533103943893 I651 -I657 0.376872869542679 L650 -M673 0.376635168787591 R640 -H666 0.326212244122066 N667 -P672 0.312420987277402 G658 -H666 0.311492114794332 R640 -I664 0.301845439394565 H642 -H666 0.298319594195808 A645 -A669 0.29312088408212 L650 -G662 0.289346757931708 I651 -G656 0.283576472933349 G654 -L660 0.268435841349167 H636 -H666 0.258191488005263 H642 -P647 0.248335596910578 G652 -L660 0.248025170000025 P641 -H666 0.246810513825445 R640 -A669 0.24642136915783 P641 -V648 0.246227641708611 R665 -M673 0.239070347929875 P641 -P672 0.224404428054117 L660 -P672 0.224008165428263 G652 -G662 0.220477884166519 V648 -P672 0.219215909597755 G652 -I657 0.214751809838637 L650 -P672 0.213274016881943 F663 -M673 0.213141480132979 T655 -G662 0.208313084244402 H666 -P672 0.198529478680996 H666 -R671 0.197323365520522 I657 -G662 0.181677090375112 L639 -P647 0.180638128722574 H636 -P659 0.18011121094559 P659 -H666 0.17985947767494 G654 -G662 0.178402350823297 N667 -M673 0.173413780558966 A643 -R671 0.170124900216093 G662 -A669 0.169494147027469 I664 -A669 0.165407185030269 A653 -G662 0.164858418088831 A637 -G656 0.163293635264111 R638 -V648 0.15786736295111 I664 -R671 0.157863460272643 G652 -M673 0.1502753717696 P647 -M673 0.148212355236657 A645 -H666 0.142875285124062 I657 -M673 0.141845593044364 R640 -P672 0.13844191482219 V648 -A668 0.137988886002528 G656 -G662 0.137471811092485 I651 -I664 0.136230588600171 R640 -A668 0.135681783911652 I649 -I664 0.134879003279143 R640 -A645 0.132258660808384 A643 -A669 0.132205313748726 A646 -A668 0.131852590471968 R640 -M673 0.131841524916554 R638 -G652 0.129887459163431 H636 -G662 0.127355209685184 H636 -G658 0.124091295064173 G652 -I664 0.123274621105404 R640 -G662 0.120760278820256 G644 -F663 0.120699596050138 G652 -F663 0.120102253139649 H642 -V648 0.111220867457952 R640 -R670 0.107466291674135 A645 -A668 0.10613185473668 P659 -N667 0.10541982760305 G644 -R665 0.0977625838376024 H636 -P641 0.0956176438695815 L639 -L650 0.0909442525935802 I651 -G662 0.0874399354987292 L639 -R665 0.0859433569209132 V648 -G662 0.0856255897569307 L660 -R671 0.084271778312402 P641 -L660 0.0842309472805702 P659 -M673 0.0832092153836537 L639 -R671 0.082745636162071 L639 -I651 0.0808430494326053 A637 -G662 0.080350732444876 G662 -M673 0.0793974534859996 A643 -I664 0.0754384126406481 L650 -A668 0.0742212901243962 I664 -R670 0.0736126440520426 P641 -P659 0.0729506032343181 I649 -G656 0.0705879193338559 A646 -H666 0.0698991918856757 V648 -H666 0.0693996980541103 R638 -G656 0.068980493188632 A653 -P659 0.0669677552286849 P647 -A668 0.0658354591105113 A643 -H666 0.0633317221621656 I649 -A668 0.0627650383161376 G662 -R671 0.0627194581115416 R638 -A646 0.062595068781819 I657 -H666 0.0616631918295374 A646 -A669 0.0614503335746226 I649 -I661 0.0614476777590429 P641 -A669 0.0599758102854464 L650 -R665 0.0585393242829721 H642 -I649 0.0577764560538175 G654 -P659 0.0561150478986185 H642 -I664 0.0541721252562715 L639 -R670 0.0532272454270522 V648 -R665 0.0530763673711758 I661 -N667 0.0491212503901695 L660 -A669 0.0470489459114996 R638 -G658 0.046613451590491 P641 -G662 0.0441194040773452 R665 -P672 0.0439848453028571 R640 -R671 0.0437538059173124 R638 -I649 0.0433751259308246 H642 -A668 0.0432002064883337 H642 -A669 0.0415358085811782 P647 -I664 0.0408902617067428 I649 -H666 0.0406867430573992 P641 -I649 0.040325944576399 P647 -F663 0.0381144788702281 I661 -M673 0.0379973430400584 A646 -I664 0.036570423635923 A643 -N667 0.0358883877859286 L639 -G644 0.0355211359813019 R638 -A643 0.0352984112714587 G662 -R670 0.0345360174538811 A637 -H642 0.0342717118144691 T655 -F663 0.0341280078144122 I649 -N667 0.0337075027017881 R665 -R671 0.0334965065680213 G644 -I649 0.0314375995240059 L660 -A668 0.0292332580508239 R640 -I661 0.0264229449341125 A653 -F663 0.0253993803479364 G644 -I664 0.0244284943350239 V648 -I661 0.0242230696222085 R638 -I651 0.0226306126472076 I649 -R665 0.0222164373672959 P641 -R665 0.0215006884502724 L660 -R670 0.0191151636194098 H636 -G656 0.0190189440750791 V648 -P659 0.0185366756758621 H636 -L660 0.0142148602295242 G658 -R665 0.0116672305907692 R638 -G662 0.0103802481344529 R665 -R670 0.00685203651001864 A643 -F663 0.00622864246023447 I661 -A669 0.00578134033593702 L639 -G656 0.000591982583623363 A643 -A668 -0.000918180768896271 G654 -I661 -0.00152550065474477 H642 -M673 -0.00156156659829687 R638 -N667 -0.00216781046354697 G656 -F663 -0.00315229669905648 R638 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