[Mon Aug 29 16:59:38 2016] >Input file: TMQ676H3M1G.pdb >TM segments: 159-172_ 401-437 MAIDEN score = -0.1177 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L406 -I435 1.25764197746983 E408 -I435 1.19333071638919 L405 -W433 1.15824068165074 L403 -L432 0.971508531106576 L403 -Q431 0.951805882649808 F409 -L436 0.904415985790824 L405 -L432 0.890591969373243 D407 -L436 0.835032892048258 L406 -W433 0.832720722273346 Y404 -V430 0.799071523550495 L406 -P434 0.728375988840646 V402 -V430 0.712693807499821 M422 -L432 0.617173793867475 L403 -V430 0.568167835590981 F409 -I435 0.551392662127592 V402 -Y428 0.549513546764391 F409 -P434 0.537003939557559 A421 -V430 0.486101597263617 E419 -P434 0.44546614370873 R420 -M425 0.441044150749633 L405 -P434 0.4348785923834 T164 -E408 0.431944489985875 L403 -W433 0.418179521078248 A410 -L436 0.355819607699966 M425 -V430 0.354216131161669 P167 -P401 0.339746781225082 K160 -L436 0.335750905176771 T164 -L405 0.321712167858402 M425 -Q431 0.307895410360553 Y404 -P417 0.296736302462195 Y404 -L432 0.28888805498933 P167 -Y404 0.288664612846534 T171 -P401 0.27984756738373 M425 -W433 0.278716883524551 L406 -L432 0.267826660690721 G161 -W433 0.249686051942401 Y404 -W433 0.24337996891213 K160 -E408 0.228817282334891 P417 -L432 0.227776173145924 T164 -T171 0.226438912291905 L405 -Q431 0.226037512779595 P401 -Q431 0.214912428913099 P417 -P434 0.211781793506978 T164 -P434 0.211156932524978 G163 -L405 0.208938470746871 A426 -Q431 0.200309373077758 G159 -L436 0.196400965908492 G163 -D407 0.18565147151797 E419 -Q431 0.184165693932815 P167 -L405 0.182784511524215 R420 -V430 0.18038074851611 K160 -F409 0.168547052200055 I166 -I435 0.167019731880172 P167 -L403 0.166334977987208 A410 -Q437 0.164896434706447 G161 -I435 0.162826720677206 G423 -G429 0.161376446620013 G163 -L436 0.156648614191552 K160 -P434 0.156540186781887 E419 -A426 0.155908104908852 K160 -Q437 0.153135516937157 I166 -L405 0.153003758459191 G413 -P434 0.147917767043889 V402 -V418 0.141531403205612 G163 -P434 0.130136631816139 D407 -I435 0.128803425931117 Y404 -A426 0.128444530635834 E408 -G413 0.123391495175113 G413 -E419 0.121915747229545 T164 -L406 0.119606840223005 F409 -E419 0.118236474533354 L170 -P401 0.117725788201416 L412 -Q437 0.117694545310816 E419 -M425 0.117314068352071 G161 -A410 0.116534940680191 P401 -L432 0.115662246176768 L405 -L436 0.115472875114607 A416 -G423 0.115322101863553 P417 -V430 0.114226907074877 L412 -P434 0.113484991552193 L403 -G427 0.112763724447828 L406 -V418 0.11137204148235 K160 -I166 0.109967225353391 T164 -I435 0.109763811519516 L424 -V430 0.106563701281942 G163 -E408 0.10540818773738 P417 -A426 0.105038119910694 L406 -V430 0.103206967886686 I165 -A172 0.0998498140401796 Y404 -G427 0.0996727276980778 T164 -Q431 0.0988952521188677 A410 -A416 0.0970651533851274 L405 -L415 0.0948851496870229 L169 -Y404 0.0947069780925558 L403 -A421 0.0946580318381929 F409 -H414 0.0913018648145192 L169 -V430 0.0897811769842436 L403 -G429 0.0873768721724 T164 -F409 0.0862586400009611 G163 -L169 0.084514017772682 G159 -E408 0.0843408581268936 L412 -L432 0.0779965396622826 R420 -G429 0.0766263520823296 L403 -V418 0.0749899710928768 L403 -I435 0.074266827346209 V402 -L424 0.0741923017769404 V162 -L436 0.073814203926035 T164 -L403 0.0730433059121207 I165 -P434 0.072654452024751 L403 -A426 0.071165924508259 K160 -D407 0.0710246871210679 L170 -L432 0.0693984401445382 G163 -N168 0.068802027685348 V418 -A426 0.0686726696820923 A416 -L424 0.0657412516216239 A172 -G429 0.0656420851314747 L403 -F409 0.0641501662989521 A172 -V402 0.0638966402396903 T164 -L170 0.0634930498063486 M422 -G427 0.0633493584998872 V418 -Y428 0.0620066221619666 G161 -N168 0.0617900753073594 V162 -Q437 0.0610250306475326 P167 -V402 0.0604834121921085 E408 -L415 0.0595988305897697 Y404 -F409 0.0595718736413868 Y404 -E419 0.0584365873496351 I165 -L405 0.0557640265379993 M422 -V430 0.0551609435225675 L403 -M422 0.0548070989788387 G159 -I165 0.0540024826320405 A410 -P417 0.0537451082675213 L405 -I435 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