[Mon Aug 29 16:59:49 2016] >Input file: TMQ67726M1G.pdb >TM segments: 563-569_ 573-580_ 588-598 MAIDEN score = 12.2365 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V565 -I578 2.14509397205913 A564 -I578 1.90329983267889 A564 -I579 1.58644262974996 Q567 -V577 1.41651361497789 L563 -I579 1.21706723815098 V565 -V577 1.09657251665483 H566 -I578 1.06448051980542 L563 -D580 1.03396315457777 H566 -V577 0.9873444261122 V565 -I579 0.72142463679263 T568 -V577 0.684634024060398 N569 -G574 0.545262518740034 A564 -D580 0.453405263717642 H566 -D580 0.39352788172452 Q567 -I578 0.363957211868001 Q567 -G575 0.362273131340492 N569 -K597 0.351143304706909 H566 -A576 0.294493579732739 A564 -G575 0.286487263485748 Q567 -E594 0.250575017628978 S591 -L596 0.170645700490025 G575 -K597 0.155346059229106 T568 -E594 0.154519853444615 I578 -E598 0.146358598940425 A564 -G574 0.130922033881657 T568 -I579 0.128851242173651 N569 -E598 0.124708676413687 L563 -I578 0.121275903694769 D580 -K588 0.107877468930353 V577 -L595 0.103747240324863 V577 -L596 0.101203652923088 G574 -K597 0.0893498060881696 Q567 -A576 0.0787241107138956 A576 -L596 0.0710398794109093 P590 -L595 0.0631535473285956 T568 -A576 0.0586051945599966 N569 -I578 0.0505402925679823 G575 -L595 0.0432786276380663 V577 -K597 0.0342733951620977 Q567 -L595 0.0284874149799954 I578 -K588 0.022429055879164 H566 -L595 0.0205914022031765 H566 -G574 0.0167063732790846 Q567 -D580 0.0133435826160775 Q567 -E598 0.00816969971497894 T568 -E598 0.00674540731469797 A576 -K597 0.0063395008078253 T568 -L595 -6.59508700593392e-05 V565 -G575 -0.00127580021523954 Q567 -V593 -0.00491933311143167 G575 -L596 -0.00540043395926126 I579 -E598 -0.00581498999019892 G575 -E598 -0.00730410729019959 Q567 -G574 -0.00743889749077153 L563 -A576 -0.0197737225117862 A564 -N569 -0.0312888123653725 N569 -L595 -0.0316518780183144 Q567 -T573 -0.034731683987471 A576 -E598 -0.0389736287747735 I578 -K597 -0.0456968849937489 I579 -K597 -0.049006078101689 V565 -G574 -0.057034262143878 N569 -L596 -0.0584750807504226 L563 -G575 -0.0586829229908989 I578 -L595 -0.0593502926540426 G574 -E598 -0.0725374619673851 N569 -V577 -0.0737975895589627 V577 -E598 -0.0756534416805765 H566 -K597 -0.0861491264826306 A576 -L595 -0.0871524596533044 V565 -K597 -0.0907041032380738 T568 -T573 -0.0957867084200323 I579 -K588 -0.100157814335167 V565 -L595 -0.108928159114853 H566 -T573 -0.133348131721934 I578 -L596 -0.155680942491356 H566 -L596 -0.159830061483438 N569 -A576 -0.16743643665111 Q567 -K597 -0.170183061471741 A564 -A576 -0.17041184633209 Q567 -I579 -0.183189775656343 T568 -K597 -0.193991862829716 H566 -G575 -0.198639764370484 V565 -A576 -0.21012311460116 Q592 -K597 -0.215488245994225 Q567 -L596 -0.225044982300333 A564 -V577 -0.242920566809307 T568 -I578 -0.247967266242201 H566 -I579 -0.24952769314492 T568 -G574 -0.256881760870063 V565 -D580 -0.261800377434506 T568 -L596 -0.287670899232944 T568 -G575 -0.315725639639763 L563 -V577 -0.44765300022783 N569 -G575 -1.17745778684262