[Fri Aug 26 17:10:58 2016] >Input file: TMQ6DN14S1D.pdb >TM segments: A658-671_A673-681 MAIDEN score = -0.0489 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L660A-F677A 0.530476082296693 H663A-W673A 0.393933914546714 H663A-K675A 0.348828507805615 D658A-F679A 0.339419705047741 T662A-T678A 0.288162120464639 T664A-L669A 0.241917002755382 K667A-W673A 0.179310898239355 T662A-W673A 0.171270306302088 L660A-N680A 0.157808237060851 L660A-W673A 0.154086520047072 T662A-K675A 0.134948179217939 V665A-K675A 0.128440010438902 T664A-N670A 0.107332680469842 T664A-V676A 0.105883858458598 L661A-P671A 0.104096775621956 N668A-N674A 0.095600148096929 T662A-P671A 0.0930347306889621 D658A-I681A 0.0889273465166736 R659A-V676A 0.0768199056360537 D658A-N680A 0.0754049952621707 R659A-N680A 0.0691272451947089 T662A-F679A 0.0651525226524985 T664A-P671A 0.0571756996770398 V665A-W673A 0.0558732523446137 T662A-N670A 0.0497295657697014 H663A-V676A 0.0248762375842353 H663A-F677A 0.0169556420893953 L660A-T678A 0.014248373295068 L660A-F679A 0.0100968985978023 D658A-F677A 0.00143601484132372 T662A-L669A 0.0011457926534838 T662A-V676A 0.000646035858248517 V665A-P671A -0.000878622659104877 N668A-W673A -0.001092961366846 R659A-I681A -0.00369431729642611 T662A-N668A -0.0164776298554754 H663A-N668A -0.0261313416912119 L661A-F679A -0.0291686690524076 Y666A-P671A -0.0355350980986489 T664A-N674A -0.0436899328335931 L661A-K675A -0.0470010486791832 T662A-F677A -0.0481322389656773 H663A-P671A -0.0490719568873377 P671A-V676A -0.0563815496632896 R659A-F677A -0.0569282704840499 H663A-N670A -0.0596418426920327 V665A-N674A -0.0633267731086116 L661A-N674A -0.0669384647911651 T664A-K675A -0.0680169010242883 L661A-F677A -0.0894604066702627 R659A-K675A -0.0898699275196004 T662A-N674A -0.0955920832516098 H663A-N674A -0.0956520906178735 R659A-T678A -0.103384210858231 R659A-F679A -0.105474221102394 L661A-T678A -0.134743258786981 L669A-N674A -0.134986096369856 V665A-N670A -0.142518684248855 Y666A-W673A -0.153367677362715 N670A-K675A -0.15920340566169 D658A-T678A -0.168638361620973 L660A-K675A -0.18115033248526 L660A-N674A -0.196899938948233 T664A-W673A -0.198715810851589 D658A-V676A -0.239425110885565 H663A-L669A -0.257242166153101 L661A-V676A -0.312431850168664 L661A-W673A -0.331924937787947 L660A-V676A -0.368232172563038