[Mon Aug 29 17:14:46 2016] >Input file: TMQ6DN14S6G.pdb >TM segments: B703-728 MAIDEN score = -1.3505 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P710B-E718B 0.494164634702888 K720B-K727B 0.48343760927388 Q719B-K727B 0.402600910908075 K706B-L711B 0.336204032652873 Q719B-L724B 0.248285287684892 Q719B-Q728B 0.2452136826807 Y722B-K727B 0.214675594432235 Q715B-K720B 0.214510854570198 K720B-Q728B 0.213296009401567 E718B-V723B 0.154021562473707 E718B-K725B 0.146985858932784 A708B-E718B 0.141618985006216 E718B-N726B 0.124238066209196 L711B-N716B 0.12316906273363 I709B-I714B 0.117879654091724 V707B-G717B 0.110805817545183 N716B-A721B 0.110429864855578 Q719B-N726B 0.102191254950559 P710B-N716B 0.0954652287447235 L704B-P710B 0.0847845721804408 L712B-G717B 0.0833590965848394 K706B-I714B 0.0827462090655771 V707B-Q715B 0.0797927696460459 V707B-I714B 0.0758845650787894 L711B-A721B 0.069648696611841 G705B-L711B 0.0605385029474738 L712B-K720B 0.0559555358913153 A708B-Q719B 0.0524547897628877 A708B-A721B 0.0522461740900448 A708B-Q715B 0.0517535535790578 N716B-Y722B 0.044457103777537 S713B-Q719B 0.0373475825502694 G705B-S713B 0.0340607440658092 I709B-G717B 0.0332046617553128 V707B-N716B 0.0249748033841453 A708B-G717B 0.0243627195514442 I709B-N716B 0.023428896003912 V707B-E718B 0.0205783297767634 G717B-V723B 0.0110704082821602 K706B-S713B 0.00932257748050147 G705B-L712B 0.00808159291624388 G717B-L724B -0.00436746855881287 I714B-Q719B -0.00985190954817128 A721B-K727B -0.0123780509976514 L712B-Q719B -0.0129226808948231 P710B-G717B -0.0171370019902842 V723B-Q728B -0.0309159914283322 A721B-Q728B -0.0381952814858089 V707B-Q719B -0.0425201497060987 G717B-Y722B -0.0550357630835525 S713B-E718B -0.0691808567609626 K720B-N726B -0.0698522930103347 L712B-E718B -0.0839285166519765 L704B-I709B -0.0927920303541204 A708B-K720B -0.0975374833296438 F703B-I709B -0.101171721920226 I709B-Q719B -0.115690163083787 I709B-E718B -0.115709576942419 L711B-E718B -0.129220098438518 L711B-K720B -0.135022348384908 K706B-N716B -0.140308333744918 G717B-K725B -0.154061399341549 A708B-N716B -0.158563829422319 L711B-Q719B -0.162486536161542 F703B-P710B -0.170783400370052 P710B-Q715B -0.171945116691445 F703B-A708B -0.177752682039421 K706B-Q715B -0.181514421454896 E718B-L724B -0.199137624855125 Q719B-K725B -0.203270029685189 A721B-N726B -0.224245015498945 K706B-L712B -0.239715210569338 G705B-P710B -0.256356726477994 I709B-Q715B -0.275624208725505 V707B-S713B -0.28312319361951 K720B-K725B -0.290633565413755 Y722B-Q728B -0.330904698296988 A708B-I714B -0.332224293960286 L711B-G717B -0.347069686835042 V707B-L712B -0.45287520062637 A708B-S713B -0.46374917744559