[Fri Aug 26 17:11:54 2016] >Input file: TMQ6DN14S7D.pdb >TM segments: A417-442 MAIDEN score = 7.0668 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C426A-F436A 1.52207238953135 L431A-F436A 0.953639057329953 L431A-A439A 0.646086521486635 P429A-A439A 0.629427535556067 P429A-R438A 0.629232394320205 G427A-F436A 0.613949023524827 A430A-F436A 0.60246361555283 P432A-A439A 0.563212427011972 P429A-F436A 0.512259868886014 L431A-C437A 0.478332066858815 L431A-R438A 0.415907032151142 P429A-C437A 0.396861170162452 P432A-Q442A 0.330627316532953 C426A-E440A 0.291384115087263 T425A-C437A 0.283127905545289 A430A-R438A 0.26096164228573 V433A-R438A 0.247823848413963 R428A-C437A 0.226351567655614 P432A-C437A 0.201780287246595 T425A-G435A 0.195047424067342 G427A-A439A 0.194784111321978 W423A-R428A 0.17969712038479 C426A-P432A 0.175996202747254 P429A-L441A 0.164873261786457 G427A-G435A 0.155241321393598 P429A-E440A 0.139766959976436 P429A-L434A 0.135888246136593 R424A-A439A 0.134243467082225 R424A-A430A 0.133578772942681 C426A-L431A 0.133412107892367 R428A-A439A 0.129103681353294 T425A-R438A 0.11730584526629 R428A-G435A 0.116103300170805 C426A-C437A 0.111536957303057 A430A-A439A 0.100724464398889 L431A-E440A 0.0990176940976966 P432A-E440A 0.09208579079902 G427A-V433A 0.0912342828934145 A430A-E440A 0.0817577884853251 V433A-L441A 0.0754686887330703 R424A-G435A 0.065000407412164 C426A-V433A 0.0575447281178949 A430A-C437A 0.0494922469764107 P429A-G435A 0.0485672710852993 S417A-W423A 0.0478148486616596 C426A-R438A 0.0471117606026423 T425A-A439A 0.0434140064891988 K419A-T425A 0.0396533954289428 A430A-Q442A 0.0320459467519374 W423A-C437A 0.0318478961846687 W423A-F436A 0.0309285650382494 R424A-F436A 0.0132276400883042 R424A-C437A 0.00438821121969646 G427A-R438A 0.00326419234025277 G427A-P432A -0.00573681953038252 A430A-L441A -0.0150561493559573 L431A-Q442A -0.0200602147686348 R428A-E440A -0.0208885088737949 F422A-R428A -0.039798797813515 S420A-T425A -0.0401659414413775 W423A-P429A -0.0496232989086787 R424A-R438A -0.0500796689000891 R428A-R438A -0.0517875198379867 V433A-Q442A -0.0551446835574114 T425A-L431A -0.0626033102531967 F422A-G427A -0.0636154332791321 S417A-F422A -0.0665928507449497 R428A-F436A -0.0742066923974849 G435A-L441A -0.07613903194577 T425A-P432A -0.0774672997202424 L431A-L441A -0.0832752955910259 T425A-F436A -0.0903074531311097 P429A-Q442A -0.104734710809964 G427A-L434A -0.106731817267487 R424A-L431A -0.10875132170478 K419A-R424A -0.109484012930797 G427A-C437A -0.113469915140778 C426A-L434A -0.12650620192499 F436A-L441A -0.128302752766458 T425A-A430A -0.132340129102822 L434A-L441A -0.146874559643077 C426A-A439A -0.154016805795953 G435A-E440A -0.205866388403712 L434A-E440A -0.21116901193534 L434A-A439A -0.241366526798275 R424A-P429A -0.24258314774247 V418A-R424A -0.248005569073778 A430A-G435A -0.263435480862304 C426A-G435A -0.267421293491677 V433A-E440A -0.318596903762419 V418A-W423A -0.351545203951064 V433A-A439A -0.35342075275622 P432A-L441A -0.541224811588799 P432A-R438A -0.591517243096446