[Fri Aug 26 17:12:19 2016] >Input file: TMQ6DVA0S1D.pdb >TM segments: A408-435 MAIDEN score = -1.8285 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D428A-H433A 0.612880526448974 V423A-D428A 0.57634264284053 I427A-D432A 0.56104945146264 K411A-E416A 0.367795858334077 D428A-V435A 0.329059268374139 Y420A-V429A 0.295620326534694 V430A-V435A 0.278998018793167 M422A-I427A 0.273523554698061 M419A-D428A 0.265287894069822 D428A-Y434A 0.250829449751811 K425A-H433A 0.245905339729984 Q417A-M422A 0.24239347166553 Y420A-K425A 0.170673082385732 L412A-Q417A 0.150485427782459 M419A-K424A 0.136438968610832 Q417A-K424A 0.134796452143175 V423A-D432A 0.129869995643101 L412A-Y420A 0.125849909079479 Y420A-D428A 0.112444186396972 E414A-E421A 0.106997618550819 E416A-I427A 0.103198331553736 E413A-K424A 0.0893798466898605 E414A-M419A 0.0863091559156066 E413A-E421A 0.0809976964881296 K424A-Y434A 0.0700822350697354 I427A-V435A 0.0698734172475071 R408A-Q417A 0.0680596546155843 E414A-Y420A 0.0671812485181812 K425A-V430A 0.0661796683855238 Q417A-I427A 0.0642805396848241 E415A-E421A 0.0641804062646035 Q417A-V423A 0.0612605453140559 R410A-E415A 0.0586333759683706 M422A-D428A 0.0519851944004244 E421A-D428A 0.0504544483397074 E413A-M419A 0.0472113131114154 I426A-V435A 0.0429614193334285 L412A-A418A 0.0399257762643241 M419A-I427A 0.028163929691511 V423A-V429A 0.0267912412676683 V423A-Q431A 0.0166795832980924 I426A-D432A 0.00361639793854174 R408A-E416A -0.00268676796771727 E416A-K425A -0.0137131183625603 R408A-E414A -0.0152952608612593 R408A-E415A -0.0176242392391041 R410A-E416A -0.0198473150119134 L412A-M419A -0.0245638282871496 M422A-V430A -0.0347434869755752 M422A-Q431A -0.0404597287952784 M419A-I426A -0.0441554984561232 R408A-E413A -0.0469390930772344 E416A-I426A -0.0476187366836163 Y420A-V430A -0.0567380052881479 E413A-I427A -0.0574241924268319 R410A-Q417A -0.062609799351079 M422A-V429A -0.064355608151778 K411A-M419A -0.0680330238843339 Y420A-Q431A -0.0736639662408231 K424A-H433A -0.0759678189831545 K425A-Y434A -0.0851716501334421 K411A-A418A -0.0959371422863082 A418A-V423A -0.0973254357513076 W409A-Q417A -0.103399555581376 K424A-D432A -0.104969539466692 V429A-Y434A -0.112642484658769 E416A-M422A -0.112812948626898 K424A-V429A -0.114658944001906 E413A-A418A -0.120316415663442 W409A-E416A -0.132497222845807 E415A-Y420A -0.135322079186484 A418A-I427A -0.137776141122266 E415A-V423A -0.140142732385999 W409A-E414A -0.140417628114706 A418A-K425A -0.141847722700151 M419A-K425A -0.165467668859931 E413A-Y420A -0.167842476271245 K425A-D432A -0.176384493189639 I426A-Y434A -0.17863537617552 E421A-I427A -0.180595085774768 E416A-E421A -0.18235427518347 W409A-E415A -0.18341737687487 I427A-Y434A -0.185596777729875 E416A-V423A -0.187989373886619 E413A-V423A -0.189354312841814 Q417A-K425A -0.190053056900092 E421A-V429A -0.191662976392243 E421A-I426A -0.194461639937614 Y420A-I426A -0.206638581670526 K424A-Q431A -0.214329330506025 K424A-V430A -0.214476006151493 K425A-Q431A -0.216205761167774 E416A-K424A -0.21704397874659 K411A-Q417A -0.221485241242634 Y420A-I427A -0.231791374535816 V429A-V435A -0.249582603851355 I426A-H433A -0.251300907360603 V423A-V430A -0.294576864351159 I426A-Q431A -0.342791340443082 A418A-K424A -0.354553167674665 I427A-H433A -0.522881035885326