[Fri Aug 26 17:23:40 2016] >Input file: TMQ6IE15S1D.pdb >TM segments: 251-261_ 263-284 MAIDEN score = 6.7374 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I260 -A274 1.3538778489257 V259 -V275 1.24015044304945 I260 -I273 1.12478576417331 I260 -V275 1.00879894217567 I258 -V276 0.891088851625938 I258 -V275 0.805991250852419 K256 -V276 0.731691532574386 H261 -I273 0.724024640248331 I258 -R277 0.683928768506865 V255 -L278 0.655030877742472 R253 -S280 0.643284349268821 V255 -S279 0.602670784291512 Y264 -N271 0.508799968842832 I258 -A274 0.505103921841674 S257 -L278 0.490712333159384 R253 -V282 0.475567869139197 I260 -D272 0.448455314980894 Y264 -I273 0.409449651320127 V259 -R277 0.403236921166533 V259 -V276 0.391491367493675 Y266 -D272 0.353864844255057 A254 -S280 0.342184732936049 H261 -H269 0.329929290533458 R253 -S279 0.32091473241622 A251 -S280 0.302261195239164 V259 -D272 0.260714511836569 R253 -P281 0.25322447911878 H261 -A274 0.223387136449916 A251 -S279 0.21620800243611 K256 -P281 0.214079051144425 Y264 -V275 0.177833481230835 H261 -D272 0.172741075200133 H261 -N271 0.133593638864701 Q252 -R277 0.125115485807362 V255 -A274 0.124987488201391 R277 -V282 0.120672937837972 I258 -Y264 0.115582407833464 S265 -A274 0.109928796813122 A254 -L283 0.104420649669427 V276 -V282 0.102888998181649 H261 -Y266 0.100647643677252 N263 -A274 0.0997823402284932 N263 -N270 0.0966445109254543 I258 -S279 0.0884702819309529 Y266 -A274 0.0845369727060827 R253 -R277 0.078416296624946 S265 -N270 0.071675457125937 I260 -N271 0.0712840720080168 A254 -V282 0.0710245175021185 A251 -P281 0.0655549257475814 H269 -A274 0.0639319905068907 R253 -L283 0.0597424715570334 H261 -A268 0.0596846865904501 V255 -V276 0.0551310826712532 S265 -I273 0.053355085364116 S257 -S280 0.052690434468341 Y264 -H269 0.0488580937980621 Q252 -P281 0.0459580958580936 R253 -V276 0.0332976483691105 N263 -N271 0.0329655915416147 I258 -I273 0.0316886830308984 V259 -Y264 0.0295372080444647 R253 -L278 0.0251585652684079 H261 -R277 0.0233884670760612 A251 -Y284 0.0178921613809151 I260 -N270 0.0169858600473911 N263 -D272 0.012030312185634 I260 -H269 0.00936654609095877 A254 -L278 0.00818664307504946 K256 -R277 0.00555242777054699 S257 -V275 0.00524193874131518 K256 -A274 0.000929568528086122 A254 -V259 -0.00634662497519045 H261 -V275 -0.00684657588582782 H261 -V276 -0.0084920602276872 I260 -A268 -0.0160150089236435 A254 -R277 -0.0169824248965236 I258 -L278 -0.02192497885554 I260 -R277 -0.0221770235617558 A254 -V275 -0.0232575120918048 I260 -Y266 -0.026268521803129 Q252 -V282 -0.0294928465051005 V259 -S265 -0.0322625739700468 V276 -P281 -0.0326956780233729 S257 -I273 -0.0333266345428798 V275 -P281 -0.0367338402876269 R253 -Y284 -0.0369040058575063 N263 -H269 -0.0373335796456525 A268 -A274 -0.0374837935640615 I258 -S280 -0.0392865233795736 Y264 -D272 -0.0421705378310095 N263 -V275 -0.0422039659904061 Q252 -S280 -0.0428312987899773 V255 -S280 -0.0438403906886244 A268 -I273 -0.0463251915163392 V255 -I260 -0.04729471998035 Q252 -V276 -0.0534659543541671 V255 -P281 -0.0599404936293952 Q252 -S279 -0.0640947340832438 R277 -L283 -0.0647383993185706 V275 -S280 -0.0683359584123808 S265 -D272 -0.0684659945674198 Q252 -Y284 -0.0730924065641841 K256 -V275 -0.0734985493636691 V259 -Y266 -0.078666335287465 V259 -N271 -0.0792637002882365 V259 -S279 -0.0796999912732759 V255 -V282 -0.0890063956986522 P267 -I273 -0.0906528662050499 A251 -L278 -0.0979909659537199 I258 -D272 -0.100581295600076 N263 -A268 -0.108848660940493 A254 -P281 -0.12043772437738 K256 -V282 -0.120731740961847 S265 -N271 -0.126012371173368 I260 -P267 -0.132748091555651 H261 -N270 -0.132956087500844 L278 -L283 -0.136572136223368 Y264 -N270 -0.139605186141768 L278 -Y284 -0.13971294574516 R253 -I258 -0.143490924882584 Q252 -L283 -0.150069406471288 K256 -S280 -0.155368898178764 A251 -L283 -0.161682235766444 S257 -P281 -0.169433770189889 N263 -I273 -0.171672476292668 S257 -A274 -0.18190133784417 Y266 -I273 -0.199790797584295 V259 -L278 -0.204408937090585 Y264 -A274 -0.230889490937032 R253 -V275 -0.279819203852947 H261 -P267 -0.309106948062233 S257 -V276 -0.322866573993871 V255 -V275 -0.346590857145659 I260 -S265 -0.352755348591081 I260 -V276 -0.358646189413109 A254 -V276 -0.371799215917836 S257 -S279 -0.37721343038657 A254 -S279 -0.39010870256261 P267 -D272 -0.393944433131314 K256 -L278 -0.422022265995643 V259 -A274 -0.424905379591439 A251 -V282 -0.445612147038005 V259 -I273 -0.462796086280509 Y266 -N271 -0.500331271673393 Q252 -L278 -0.502660351611603 S257 -R277 -0.594438535189294 K256 -S279 -0.601806523444762 V255 -R277 -0.73115106772663